RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 LCE1AQ5T7P2 110 aa6.96□□□□□ -1.29
CDX4-201ENST00000373514 PP632Q6XCG6 107 aa6.96□□□□□ -1.29
CDX4-201ENST00000373514 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
CDX4-201ENST00000373514 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
CDX4-201ENST00000373514 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
CDX4-201ENST00000373514 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
CDX4-201ENST00000373514 MT1EP04732 61 aa6.86□□□□□ -1.31
CDX4-201ENST00000373514 SPRR2DP22532 72 aa6.76□□□□□ -1.33
CDX4-201ENST00000373514 KRTAP20-1Q3LI63 56 aa6.75□□□□□ -1.33
CDX4-201ENST00000373514 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
CDX4-201ENST00000373514 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
CDX4-201ENST00000373514 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
CDX4-201ENST00000373514 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
CDX4-201ENST00000373514 H3BS24 57 aa6.67□□□□□ -1.34
CDX4-201ENST00000373514 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
CDX4-201ENST00000373514 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
CDX4-201ENST00000373514 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
CDX4-201ENST00000373514 MT1LQ93083 61 aa6.63□□□□□ -1.35
CDX4-201ENST00000373514 MT1GP13640 62 aa6.55□□□□□ -1.36
CDX4-201ENST00000373514 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
CDX4-201ENST00000373514 MT1MQ8N339 61 aa6.51□□□□□ -1.37
CDX4-201ENST00000373514 KRTAP2-2Q9BYT5 123 aa6.45□□□□□ -1.38
CDX4-201ENST00000373514 KRTAP2-1Q9BYU5 128 aa6.45□□□□□ -1.38
CDX4-201ENST00000373514 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
CDX4-201ENST00000373514 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
CDX4-201ENST00000373514 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
CDX4-201ENST00000373514 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
CDX4-201ENST00000373514 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
CDX4-201ENST00000373514 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
CDX4-201ENST00000373514 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
CDX4-201ENST00000373514 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
CDX4-201ENST00000373514 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
CDX4-201ENST00000373514 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
CDX4-201ENST00000373514 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CDX4-201ENST00000373514 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
CDX4-201ENST00000373514 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
CDX4-201ENST00000373514 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
CDX4-201ENST00000373514 MT4P47944 62 aa5.91□□□□□ -1.46
CDX4-201ENST00000373514 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
CDX4-201ENST00000373514 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
CDX4-201ENST00000373514 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
CDX4-201ENST00000373514 NDUFAF8A1L188 74 aa5.65□□□□□ -1.5
CDX4-201ENST00000373514 MT1AP04731 61 aa5.64□□□□□ -1.51
CDX4-201ENST00000373514 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
CDX4-201ENST00000373514 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
CDX4-201ENST00000373514 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
CDX4-201ENST00000373514 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
CDX4-201ENST00000373514 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
CDX4-201ENST00000373514 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
CDX4-201ENST00000373514 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
CDX4-201ENST00000373514 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
CDX4-201ENST00000373514 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
CDX4-201ENST00000373514 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
CDX4-201ENST00000373514 MT3P25713 68 aa5.09□□□□□ -1.59
CDX4-201ENST00000373514 KRTAP5-7Q6L8G8 165 aa4.98□□□□□ -1.61
CDX4-201ENST00000373514 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
CDX4-201ENST00000373514 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
CDX4-201ENST00000373514 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
CDX4-201ENST00000373514 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
CDX4-201ENST00000373514 INE1O15225 51 aa4.64□□□□□ -1.67
CDX4-201ENST00000373514 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
CDX4-201ENST00000373514 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
CDX4-201ENST00000373514 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
CDX4-201ENST00000373514 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
CDX4-201ENST00000373514 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
CDX4-201ENST00000373514 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
CDX4-201ENST00000373514 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
CDX4-201ENST00000373514 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
CDX4-201ENST00000373514 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
CDX4-201ENST00000373514 PRM1P04553 51 aa3.91□□□□□ -1.78
CDX4-201ENST00000373514 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CDX4-201ENST00000373514 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
CDX4-201ENST00000373514 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
CDX4-201ENST00000373514 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
CDX4-201ENST00000373514 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
CDX4-201ENST00000373514 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
CDX4-201ENST00000373514 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 1021.8 ms