RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
ATG4A-204ENST00000372246 KRTAP10-5P60370 271 aa2.25□□□□□ -2.05
ATG4A-204ENST00000372246 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
ATG4A-204ENST00000372246 KMT2DO14686 5537 aa2.24□□□□□ -2.05
ATG4A-204ENST00000372246 USH2AO75445 5202 aa2.21□□□□□ -2.05
ATG4A-204ENST00000372246 KRTAP10-12P60413 245 aa2.2□□□□□ -2.06
ATG4A-204ENST00000372246 M0R2T5 61 aa2.18□□□□□ -2.06
ATG4A-204ENST00000372246 MT1FP04733 61 aa2.15□□□□□ -2.07
ATG4A-204ENST00000372246 KRTAP10-10P60014 251 aa2.15□□□□□ -2.07
ATG4A-204ENST00000372246 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
ATG4A-204ENST00000372246 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
ATG4A-204ENST00000372246 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
ATG4A-204ENST00000372246 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
ATG4A-204ENST00000372246 MT2AP02795 61 aa2.11□□□□□ -2.07
ATG4A-204ENST00000372246 MT1HP80294 61 aa2.11□□□□□ -2.07
ATG4A-204ENST00000372246 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
ATG4A-204ENST00000372246 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
ATG4A-204ENST00000372246 MT1XP80297 61 aa2.1□□□□□ -2.07
ATG4A-204ENST00000372246 KRTAP8-1Q8IUC2 63 aa2.08□□□□□ -2.08
ATG4A-204ENST00000372246 MT1BP07438 61 aa2.08□□□□□ -2.08
ATG4A-204ENST00000372246 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
ATG4A-204ENST00000372246 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
ATG4A-204ENST00000372246 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
ATG4A-204ENST00000372246 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
ATG4A-204ENST00000372246 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
ATG4A-204ENST00000372246 NEBP20929 6669 aa1.97□□□□□ -2.09
ATG4A-204ENST00000372246 KRTAP5-9P26371 169 aa1.95□□□□□ -2.1
ATG4A-204ENST00000372246 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
ATG4A-204ENST00000372246 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
ATG4A-204ENST00000372246 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
ATG4A-204ENST00000372246 FCGBPQ9Y6R7 5405 aaPredicted RBP1.9□□□□□ -2.11
ATG4A-204ENST00000372246 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.11
ATG4A-204ENST00000372246 KRTAP4-3Q9BYR4 195 aa1.88□□□□□ -2.11
ATG4A-204ENST00000372246 SSPOA2VEC9 5147 aa1.87□□□□□ -2.11
ATG4A-204ENST00000372246 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
ATG4A-204ENST00000372246 KRTAP19-7Q3SYF9 63 aa1.86□□□□□ -2.11
ATG4A-204ENST00000372246 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
ATG4A-204ENST00000372246 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
ATG4A-204ENST00000372246 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
ATG4A-204ENST00000372246 KRTAP2-1Q9BYU5 128 aa1.85□□□□□ -2.11
ATG4A-204ENST00000372246 MACF1Q9UPN3 7388 aaKnown RBP1.85□□□□□ -2.11
ATG4A-204ENST00000372246 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
ATG4A-204ENST00000372246 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.12
ATG4A-204ENST00000372246 MT1LQ93083 61 aa1.8□□□□□ -2.12
ATG4A-204ENST00000372246 MT1GP13640 62 aa1.79□□□□□ -2.12
ATG4A-204ENST00000372246 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
ATG4A-204ENST00000372246 MT1EP04732 61 aa1.77□□□□□ -2.13
ATG4A-204ENST00000372246 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
ATG4A-204ENST00000372246 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
ATG4A-204ENST00000372246 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
ATG4A-204ENST00000372246 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
ATG4A-204ENST00000372246 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
ATG4A-204ENST00000372246 MDN1Q9NU22 5596 aa1.66□□□□□ -2.14
ATG4A-204ENST00000372246 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
ATG4A-204ENST00000372246 MT1MQ8N339 61 aa1.65□□□□□ -2.15
ATG4A-204ENST00000372246 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
ATG4A-204ENST00000372246 PRM1P04553 51 aa1.6□□□□□ -2.15
ATG4A-204ENST00000372246 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
ATG4A-204ENST00000372246 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
ATG4A-204ENST00000372246 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
ATG4A-204ENST00000372246 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
ATG4A-204ENST00000372246 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
ATG4A-204ENST00000372246 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
ATG4A-204ENST00000372246 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
ATG4A-204ENST00000372246 SPRR2EP22531 72 aa1.48□□□□□ -2.17
ATG4A-204ENST00000372246 SPRR2BP35325 72 aa1.48□□□□□ -2.17
ATG4A-204ENST00000372246 SPRR2AP35326 72 aa1.48□□□□□ -2.17
ATG4A-204ENST00000372246 MT1AP04731 61 aa1.46□□□□□ -2.18
ATG4A-204ENST00000372246 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
ATG4A-204ENST00000372246 SPRR2DP22532 72 aa1.44□□□□□ -2.18
ATG4A-204ENST00000372246 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
ATG4A-204ENST00000372246 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
ATG4A-204ENST00000372246 MT4P47944 62 aa1.24□□□□□ -2.21
ATG4A-204ENST00000372246 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
ATG4A-204ENST00000372246 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
ATG4A-204ENST00000372246 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
ATG4A-204ENST00000372246 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
ATG4A-204ENST00000372246 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 141.5 ms