RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
DEPDC1-201ENST00000370966 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-201ENST00000370966 MT1MQ8N339 61 aa3.76□□□□□ -1.81
DEPDC1-201ENST00000370966 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
DEPDC1-201ENST00000370966 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
DEPDC1-201ENST00000370966 MUC2Q02817 5179 aa3.65□□□□□ -1.83
DEPDC1-201ENST00000370966 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
DEPDC1-201ENST00000370966 LCE2DQ5TA82 110 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1-201ENST00000370966 MT3P25713 68 aa3.6□□□□□ -1.83
DEPDC1-201ENST00000370966 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
DEPDC1-201ENST00000370966 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
DEPDC1-201ENST00000370966 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
DEPDC1-201ENST00000370966 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
DEPDC1-201ENST00000370966 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
DEPDC1-201ENST00000370966 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
DEPDC1-201ENST00000370966 MT1AP04731 61 aa3.51□□□□□ -1.85
DEPDC1-201ENST00000370966 PRM1P04553 51 aa3.44□□□□□ -1.86
DEPDC1-201ENST00000370966 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
DEPDC1-201ENST00000370966 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
DEPDC1-201ENST00000370966 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
DEPDC1-201ENST00000370966 MT4P47944 62 aa3.4□□□□□ -1.87
DEPDC1-201ENST00000370966 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
DEPDC1-201ENST00000370966 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
DEPDC1-201ENST00000370966 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
DEPDC1-201ENST00000370966 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
DEPDC1-201ENST00000370966 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
DEPDC1-201ENST00000370966 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
DEPDC1-201ENST00000370966 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
DEPDC1-201ENST00000370966 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-201ENST00000370966 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-201ENST00000370966 USH2AO75445 5202 aa3.22□□□□□ -1.89
DEPDC1-201ENST00000370966 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
DEPDC1-201ENST00000370966 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
DEPDC1-201ENST00000370966 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
DEPDC1-201ENST00000370966 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.91
DEPDC1-201ENST00000370966 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-201ENST00000370966 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
DEPDC1-201ENST00000370966 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
DEPDC1-201ENST00000370966 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.92
DEPDC1-201ENST00000370966 KMT2DO14686 5537 aa3.06□□□□□ -1.92
DEPDC1-201ENST00000370966 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
DEPDC1-201ENST00000370966 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
DEPDC1-201ENST00000370966 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
DEPDC1-201ENST00000370966 SSPOA2VEC9 5147 aa2.9□□□□□ -1.94
DEPDC1-201ENST00000370966 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
DEPDC1-201ENST00000370966 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
DEPDC1-201ENST00000370966 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
DEPDC1-201ENST00000370966 NEBP20929 6669 aa2.72□□□□□ -1.97
DEPDC1-201ENST00000370966 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
DEPDC1-201ENST00000370966 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
DEPDC1-201ENST00000370966 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
DEPDC1-201ENST00000370966 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
DEPDC1-201ENST00000370966 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
DEPDC1-201ENST00000370966 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
DEPDC1-201ENST00000370966 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
DEPDC1-201ENST00000370966 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
DEPDC1-201ENST00000370966 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
DEPDC1-201ENST00000370966 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
DEPDC1-201ENST00000370966 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
DEPDC1-201ENST00000370966 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
DEPDC1-201ENST00000370966 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
DEPDC1-201ENST00000370966 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
DEPDC1-201ENST00000370966 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
DEPDC1-201ENST00000370966 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
DEPDC1-201ENST00000370966 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
DEPDC1-201ENST00000370966 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
DEPDC1-201ENST00000370966 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
DEPDC1-201ENST00000370966 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
DEPDC1-201ENST00000370966 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1-201ENST00000370966 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
DEPDC1-201ENST00000370966 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
DEPDC1-201ENST00000370966 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
DEPDC1-201ENST00000370966 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
DEPDC1-201ENST00000370966 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
DEPDC1-201ENST00000370966 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
DEPDC1-201ENST00000370966 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
DEPDC1-201ENST00000370966 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms