RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
TGFBR3-202ENST00000370399 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
TGFBR3-202ENST00000370399 MT1GP13640 62 aa2.45□□□□□ -2.02
TGFBR3-202ENST00000370399 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
TGFBR3-202ENST00000370399 MT1EP04732 61 aa2.44□□□□□ -2.02
TGFBR3-202ENST00000370399 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
TGFBR3-202ENST00000370399 MT1LQ93083 61 aa2.44□□□□□ -2.02
TGFBR3-202ENST00000370399 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
TGFBR3-202ENST00000370399 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
TGFBR3-202ENST00000370399 SPRR2EP22531 72 aa2.39□□□□□ -2.03
TGFBR3-202ENST00000370399 SPRR2BP35325 72 aa2.39□□□□□ -2.03
TGFBR3-202ENST00000370399 SPRR2AP35326 72 aa2.39□□□□□ -2.03
TGFBR3-202ENST00000370399 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
TGFBR3-202ENST00000370399 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
TGFBR3-202ENST00000370399 LOC100996750A0A140TA64 210 aa2.37□□□□□ -2.03
TGFBR3-202ENST00000370399 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
TGFBR3-202ENST00000370399 KRTAP19-4Q3LI73 84 aa2.35□□□□□ -2.03
TGFBR3-202ENST00000370399 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
TGFBR3-202ENST00000370399 MT1MQ8N339 61 aa2.33□□□□□ -2.04
TGFBR3-202ENST00000370399 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
TGFBR3-202ENST00000370399 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
TGFBR3-202ENST00000370399 SPRR2DP22532 72 aa2.29□□□□□ -2.04
TGFBR3-202ENST00000370399 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
TGFBR3-202ENST00000370399 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.22□□□□□ -2.05
TGFBR3-202ENST00000370399 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
TGFBR3-202ENST00000370399 LCE5AQ5TCM9 118 aa2.18□□□□□ -2.06
TGFBR3-202ENST00000370399 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
TGFBR3-202ENST00000370399 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
TGFBR3-202ENST00000370399 KRTAP4-9Q9BYQ8 210 aa2.15□□□□□ -2.07
TGFBR3-202ENST00000370399 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
TGFBR3-202ENST00000370399 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
TGFBR3-202ENST00000370399 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
TGFBR3-202ENST00000370399 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
TGFBR3-202ENST00000370399 NEBP20929 6669 aa2.11□□□□□ -2.07
TGFBR3-202ENST00000370399 MT4P47944 62 aa2.1□□□□□ -2.07
TGFBR3-202ENST00000370399 LCE4AQ5TA78 99 aa2.09□□□□□ -2.07
TGFBR3-202ENST00000370399 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
TGFBR3-202ENST00000370399 MT1AP04731 61 aa2.07□□□□□ -2.08
TGFBR3-202ENST00000370399 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
TGFBR3-202ENST00000370399 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
TGFBR3-202ENST00000370399 KRTAP9-4Q9BYQ2 154 aa2.05□□□□□ -2.08
TGFBR3-202ENST00000370399 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
TGFBR3-202ENST00000370399 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
TGFBR3-202ENST00000370399 KRTAP5-9P26371 169 aa2.02□□□□□ -2.09
TGFBR3-202ENST00000370399 MT3P25713 68 aa2.01□□□□□ -2.09
TGFBR3-202ENST00000370399 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
TGFBR3-202ENST00000370399 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
TGFBR3-202ENST00000370399 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
TGFBR3-202ENST00000370399 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
TGFBR3-202ENST00000370399 PRM1P04553 51 aa1.93□□□□□ -2.1
TGFBR3-202ENST00000370399 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
TGFBR3-202ENST00000370399 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
TGFBR3-202ENST00000370399 LCE1DQ5T752 114 aa1.9□□□□□ -2.11
TGFBR3-202ENST00000370399 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
TGFBR3-202ENST00000370399 KRTAP2-2Q9BYT5 123 aa1.87□□□□□ -2.11
TGFBR3-202ENST00000370399 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
TGFBR3-202ENST00000370399 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.12
TGFBR3-202ENST00000370399 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
TGFBR3-202ENST00000370399 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
TGFBR3-202ENST00000370399 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
TGFBR3-202ENST00000370399 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
TGFBR3-202ENST00000370399 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
TGFBR3-202ENST00000370399 KRTAP5-4Q6L8H1 288 aa1.64□□□□□ -2.15
TGFBR3-202ENST00000370399 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
TGFBR3-202ENST00000370399 KRTAP5-3Q6L8H2 238 aa1.57□□□□□ -2.16
TGFBR3-202ENST00000370399 KRTAP4-11Q9BYQ6 195 aa1.54□□□□□ -2.16
TGFBR3-202ENST00000370399 LCE1CQ5T751 118 aa1.52□□□□□ -2.17
TGFBR3-202ENST00000370399 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
TGFBR3-202ENST00000370399 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
TGFBR3-202ENST00000370399 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
TGFBR3-202ENST00000370399 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
TGFBR3-202ENST00000370399 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
TGFBR3-202ENST00000370399 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
TGFBR3-202ENST00000370399 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
TGFBR3-202ENST00000370399 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
TGFBR3-202ENST00000370399 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
TGFBR3-202ENST00000370399 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms