RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
ABCA4-201ENST00000370225 BIRC6Q9NR09 4857 aa2.65□□□□□ -1.99
ABCA4-201ENST00000370225 KRTAP9-6A0A140TA67 174 aa2.63□□□□□ -1.99
ABCA4-201ENST00000370225 KMT2CQ8NEZ4 4911 aaKnown RBP2.63□□□□□ -1.99
ABCA4-201ENST00000370225 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
ABCA4-201ENST00000370225 PRM1P04553 51 aa2.61□□□□□ -1.99
ABCA4-201ENST00000370225 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
ABCA4-201ENST00000370225 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
ABCA4-201ENST00000370225 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
ABCA4-201ENST00000370225 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
ABCA4-201ENST00000370225 FSIP2Q5CZC0 6907 aa2.53□□□□□ -2
ABCA4-201ENST00000370225 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
ABCA4-201ENST00000370225 LCE2AQ5TA79 106 aaPredicted RBP2.47□□□□□ -2.01
ABCA4-201ENST00000370225 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
ABCA4-201ENST00000370225 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
ABCA4-201ENST00000370225 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
ABCA4-201ENST00000370225 MT1AP04731 61 aa2.42□□□□□ -2.02
ABCA4-201ENST00000370225 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
ABCA4-201ENST00000370225 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
ABCA4-201ENST00000370225 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
ABCA4-201ENST00000370225 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
ABCA4-201ENST00000370225 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
ABCA4-201ENST00000370225 FAT4Q6V0I7 4981 aa2.38□□□□□ -2.03
ABCA4-201ENST00000370225 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.36□□□□□ -2.03
ABCA4-201ENST00000370225 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
ABCA4-201ENST00000370225 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
ABCA4-201ENST00000370225 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
ABCA4-201ENST00000370225 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
ABCA4-201ENST00000370225 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
ABCA4-201ENST00000370225 KRTAP6-3Q3LI67 103 aa2.35□□□□□ -2.03
ABCA4-201ENST00000370225 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.03
ABCA4-201ENST00000370225 MUC2Q02817 5179 aa2.32□□□□□ -2.04
ABCA4-201ENST00000370225 RNF213Q63HN8 5207 aa2.3□□□□□ -2.04
ABCA4-201ENST00000370225 KRTAP9-4Q9BYQ2 154 aa2.29□□□□□ -2.04
ABCA4-201ENST00000370225 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
ABCA4-201ENST00000370225 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
ABCA4-201ENST00000370225 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
ABCA4-201ENST00000370225 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
ABCA4-201ENST00000370225 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
ABCA4-201ENST00000370225 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
ABCA4-201ENST00000370225 KMT2DO14686 5537 aa2.07□□□□□ -2.08
ABCA4-201ENST00000370225 KRTAP4-6Q9BYQ5 205 aa2.02□□□□□ -2.09
ABCA4-201ENST00000370225 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
ABCA4-201ENST00000370225 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
ABCA4-201ENST00000370225 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
ABCA4-201ENST00000370225 NEBP20929 6669 aa1.97□□□□□ -2.09
ABCA4-201ENST00000370225 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
ABCA4-201ENST00000370225 USH2AO75445 5202 aa1.94□□□□□ -2.1
ABCA4-201ENST00000370225 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
ABCA4-201ENST00000370225 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
ABCA4-201ENST00000370225 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
ABCA4-201ENST00000370225 KRTAP4-2Q9BYR5 136 aa1.92□□□□□ -2.1
ABCA4-201ENST00000370225 KRTAP5-9P26371 169 aa1.89□□□□□ -2.11
ABCA4-201ENST00000370225 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
ABCA4-201ENST00000370225 MUC12Q9UKN1 5478 aa1.75□□□□□ -2.13
ABCA4-201ENST00000370225 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
ABCA4-201ENST00000370225 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
ABCA4-201ENST00000370225 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
ABCA4-201ENST00000370225 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
ABCA4-201ENST00000370225 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
ABCA4-201ENST00000370225 KRTAP5-3Q6L8H2 238 aa1.54□□□□□ -2.16
ABCA4-201ENST00000370225 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
ABCA4-201ENST00000370225 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
ABCA4-201ENST00000370225 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
ABCA4-201ENST00000370225 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.2
ABCA4-201ENST00000370225 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
ABCA4-201ENST00000370225 KRTAP5-2Q701N4 177 aa1.23□□□□□ -2.21
ABCA4-201ENST00000370225 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
ABCA4-201ENST00000370225 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
ABCA4-201ENST00000370225 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
ABCA4-201ENST00000370225 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
ABCA4-201ENST00000370225 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
ABCA4-201ENST00000370225 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
ABCA4-201ENST00000370225 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
ABCA4-201ENST00000370225 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.24
ABCA4-201ENST00000370225 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.96□□□□□ -2.26
ABCA4-201ENST00000370225 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 123.2 ms