RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
BRCC3-204ENST00000369462 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
BRCC3-204ENST00000369462 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
BRCC3-204ENST00000369462 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
BRCC3-204ENST00000369462 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
BRCC3-204ENST00000369462 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
BRCC3-204ENST00000369462 KRTAP6-3Q3LI67 103 aa4.08□□□□□ -1.76
BRCC3-204ENST00000369462 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
BRCC3-204ENST00000369462 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
BRCC3-204ENST00000369462 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
BRCC3-204ENST00000369462 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
BRCC3-204ENST00000369462 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
BRCC3-204ENST00000369462 MT1EP04732 61 aa4.01□□□□□ -1.77
BRCC3-204ENST00000369462 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
BRCC3-204ENST00000369462 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
BRCC3-204ENST00000369462 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
BRCC3-204ENST00000369462 SPRR2EP22531 72 aa3.91□□□□□ -1.78
BRCC3-204ENST00000369462 SPRR2BP35325 72 aa3.91□□□□□ -1.78
BRCC3-204ENST00000369462 SPRR2AP35326 72 aa3.91□□□□□ -1.78
BRCC3-204ENST00000369462 MT1LQ93083 61 aa3.9□□□□□ -1.78
BRCC3-204ENST00000369462 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
BRCC3-204ENST00000369462 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
BRCC3-204ENST00000369462 NEBP20929 6669 aa3.86□□□□□ -1.79
BRCC3-204ENST00000369462 MT1GP13640 62 aa3.85□□□□□ -1.79
BRCC3-204ENST00000369462 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
BRCC3-204ENST00000369462 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
BRCC3-204ENST00000369462 MT1MQ8N339 61 aa3.79□□□□□ -1.8
BRCC3-204ENST00000369462 SPRR2DP22532 72 aa3.77□□□□□ -1.81
BRCC3-204ENST00000369462 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
BRCC3-204ENST00000369462 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
BRCC3-204ENST00000369462 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
BRCC3-204ENST00000369462 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
BRCC3-204ENST00000369462 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
BRCC3-204ENST00000369462 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
BRCC3-204ENST00000369462 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
BRCC3-204ENST00000369462 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
BRCC3-204ENST00000369462 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
BRCC3-204ENST00000369462 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
BRCC3-204ENST00000369462 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
BRCC3-204ENST00000369462 MT3P25713 68 aa3.53□□□□□ -1.84
BRCC3-204ENST00000369462 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
BRCC3-204ENST00000369462 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
BRCC3-204ENST00000369462 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
BRCC3-204ENST00000369462 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
BRCC3-204ENST00000369462 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
BRCC3-204ENST00000369462 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
BRCC3-204ENST00000369462 MT1AP04731 61 aa3.31□□□□□ -1.88
BRCC3-204ENST00000369462 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
BRCC3-204ENST00000369462 MT4P47944 62 aa3.29□□□□□ -1.88
BRCC3-204ENST00000369462 INE1O15225 51 aa3.25□□□□□ -1.89
BRCC3-204ENST00000369462 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
BRCC3-204ENST00000369462 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
BRCC3-204ENST00000369462 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
BRCC3-204ENST00000369462 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.9
BRCC3-204ENST00000369462 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
BRCC3-204ENST00000369462 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
BRCC3-204ENST00000369462 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
BRCC3-204ENST00000369462 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
BRCC3-204ENST00000369462 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
BRCC3-204ENST00000369462 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
BRCC3-204ENST00000369462 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
BRCC3-204ENST00000369462 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
BRCC3-204ENST00000369462 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
BRCC3-204ENST00000369462 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
BRCC3-204ENST00000369462 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
BRCC3-204ENST00000369462 MUC5ACP98088 5654 aa2.58□□□□□ -2
BRCC3-204ENST00000369462 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
BRCC3-204ENST00000369462 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
BRCC3-204ENST00000369462 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
BRCC3-204ENST00000369462 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
BRCC3-204ENST00000369462 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
BRCC3-204ENST00000369462 PRM1P04553 51 aa2.27□□□□□ -2.05
BRCC3-204ENST00000369462 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
BRCC3-204ENST00000369462 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
BRCC3-204ENST00000369462 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
BRCC3-204ENST00000369462 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
BRCC3-204ENST00000369462 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 224.8 ms