RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
PRDM1-203ENST00000369096 MT1LQ93083 61 aa4.99□□□□□ -1.61
PRDM1-203ENST00000369096 PRM1P04553 51 aa4.96□□□□□ -1.62
PRDM1-203ENST00000369096 MT3P25713 68 aa4.95□□□□□ -1.62
PRDM1-203ENST00000369096 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
PRDM1-203ENST00000369096 MT4P47944 62 aa4.9□□□□□ -1.63
PRDM1-203ENST00000369096 MT1EP04732 61 aa4.89□□□□□ -1.63
PRDM1-203ENST00000369096 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
PRDM1-203ENST00000369096 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
PRDM1-203ENST00000369096 MT1MQ8N339 61 aa4.79□□□□□ -1.64
PRDM1-203ENST00000369096 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
PRDM1-203ENST00000369096 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
PRDM1-203ENST00000369096 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
PRDM1-203ENST00000369096 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
PRDM1-203ENST00000369096 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
PRDM1-203ENST00000369096 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
PRDM1-203ENST00000369096 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
PRDM1-203ENST00000369096 MT1AP04731 61 aa4.51□□□□□ -1.69
PRDM1-203ENST00000369096 USH2AO75445 5202 aa4.5□□□□□ -1.69
PRDM1-203ENST00000369096 FSIP2Q5CZC0 6907 aa4.49□□□□□ -1.69
PRDM1-203ENST00000369096 KMT2DO14686 5537 aa4.45□□□□□ -1.7
PRDM1-203ENST00000369096 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
PRDM1-203ENST00000369096 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
PRDM1-203ENST00000369096 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
PRDM1-203ENST00000369096 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
PRDM1-203ENST00000369096 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
PRDM1-203ENST00000369096 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
PRDM1-203ENST00000369096 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
PRDM1-203ENST00000369096 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
PRDM1-203ENST00000369096 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
PRDM1-203ENST00000369096 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
PRDM1-203ENST00000369096 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
PRDM1-203ENST00000369096 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
PRDM1-203ENST00000369096 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
PRDM1-203ENST00000369096 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
PRDM1-203ENST00000369096 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
PRDM1-203ENST00000369096 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
PRDM1-203ENST00000369096 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
PRDM1-203ENST00000369096 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
PRDM1-203ENST00000369096 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
PRDM1-203ENST00000369096 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
PRDM1-203ENST00000369096 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
PRDM1-203ENST00000369096 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
PRDM1-203ENST00000369096 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
PRDM1-203ENST00000369096 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
PRDM1-203ENST00000369096 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
PRDM1-203ENST00000369096 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
PRDM1-203ENST00000369096 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
PRDM1-203ENST00000369096 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
PRDM1-203ENST00000369096 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
PRDM1-203ENST00000369096 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
PRDM1-203ENST00000369096 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
PRDM1-203ENST00000369096 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
PRDM1-203ENST00000369096 NEBP20929 6669 aa3.47□□□□□ -1.85
PRDM1-203ENST00000369096 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
PRDM1-203ENST00000369096 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
PRDM1-203ENST00000369096 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
PRDM1-203ENST00000369096 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
PRDM1-203ENST00000369096 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
PRDM1-203ENST00000369096 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.9
PRDM1-203ENST00000369096 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
PRDM1-203ENST00000369096 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
PRDM1-203ENST00000369096 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
PRDM1-203ENST00000369096 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
PRDM1-203ENST00000369096 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
PRDM1-203ENST00000369096 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
PRDM1-203ENST00000369096 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
PRDM1-203ENST00000369096 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
PRDM1-203ENST00000369096 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
PRDM1-203ENST00000369096 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
PRDM1-203ENST00000369096 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
PRDM1-203ENST00000369096 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
PRDM1-203ENST00000369096 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
PRDM1-203ENST00000369096 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
PRDM1-203ENST00000369096 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
PRDM1-203ENST00000369096 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
PRDM1-203ENST00000369096 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 106.4 ms