RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
COPA-202ENST00000368069 MT1MQ8N339 61 aa3.71□□□□□ -1.82
COPA-202ENST00000368069 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
COPA-202ENST00000368069 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
COPA-202ENST00000368069 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
COPA-202ENST00000368069 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
COPA-202ENST00000368069 SPRR2DP22532 72 aa3.67□□□□□ -1.82
COPA-202ENST00000368069 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
COPA-202ENST00000368069 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
COPA-202ENST00000368069 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
COPA-202ENST00000368069 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
COPA-202ENST00000368069 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.84
COPA-202ENST00000368069 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
COPA-202ENST00000368069 LCE2DQ5TA82 110 aaPredicted RBP3.46□□□□□ -1.86
COPA-202ENST00000368069 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
COPA-202ENST00000368069 USH2AO75445 5202 aa3.44□□□□□ -1.86
COPA-202ENST00000368069 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
COPA-202ENST00000368069 KMT2DO14686 5537 aa3.41□□□□□ -1.86
COPA-202ENST00000368069 PRM1P04553 51 aa3.41□□□□□ -1.86
COPA-202ENST00000368069 MT1AP04731 61 aa3.41□□□□□ -1.86
COPA-202ENST00000368069 MT3P25713 68 aa3.39□□□□□ -1.87
COPA-202ENST00000368069 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
COPA-202ENST00000368069 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
COPA-202ENST00000368069 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
COPA-202ENST00000368069 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
COPA-202ENST00000368069 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
COPA-202ENST00000368069 MT4P47944 62 aa3.27□□□□□ -1.89
COPA-202ENST00000368069 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
COPA-202ENST00000368069 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
COPA-202ENST00000368069 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
COPA-202ENST00000368069 SSPOA2VEC9 5147 aa3.15□□□□□ -1.9
COPA-202ENST00000368069 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
COPA-202ENST00000368069 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
COPA-202ENST00000368069 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
COPA-202ENST00000368069 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
COPA-202ENST00000368069 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
COPA-202ENST00000368069 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
COPA-202ENST00000368069 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
COPA-202ENST00000368069 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.92
COPA-202ENST00000368069 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
COPA-202ENST00000368069 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
COPA-202ENST00000368069 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
COPA-202ENST00000368069 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
COPA-202ENST00000368069 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
COPA-202ENST00000368069 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
COPA-202ENST00000368069 NEBP20929 6669 aa2.71□□□□□ -1.97
COPA-202ENST00000368069 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
COPA-202ENST00000368069 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
COPA-202ENST00000368069 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
COPA-202ENST00000368069 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
COPA-202ENST00000368069 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
COPA-202ENST00000368069 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
COPA-202ENST00000368069 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
COPA-202ENST00000368069 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
COPA-202ENST00000368069 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
COPA-202ENST00000368069 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
COPA-202ENST00000368069 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
COPA-202ENST00000368069 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
COPA-202ENST00000368069 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
COPA-202ENST00000368069 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.05
COPA-202ENST00000368069 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.05
COPA-202ENST00000368069 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
COPA-202ENST00000368069 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
COPA-202ENST00000368069 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
COPA-202ENST00000368069 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
COPA-202ENST00000368069 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
COPA-202ENST00000368069 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
COPA-202ENST00000368069 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
COPA-202ENST00000368069 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
COPA-202ENST00000368069 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
COPA-202ENST00000368069 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
COPA-202ENST00000368069 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
COPA-202ENST00000368069 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
COPA-202ENST00000368069 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
COPA-202ENST00000368069 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.14
COPA-202ENST00000368069 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
COPA-202ENST00000368069 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms