RNA–Protein interactions for RNA: ENST00000366662.8

TTC13-202, Transcript of tetratricopeptide repeat domain 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC13, Length 3,112 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-202ENST00000366662 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
TTC13-202ENST00000366662 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
TTC13-202ENST00000366662 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
TTC13-202ENST00000366662 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
TTC13-202ENST00000366662 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
TTC13-202ENST00000366662 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.49
TTC13-202ENST00000366662 MT1GP13640 62 aa5.7□□□□□ -1.5
TTC13-202ENST00000366662 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
TTC13-202ENST00000366662 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
TTC13-202ENST00000366662 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
TTC13-202ENST00000366662 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.51
TTC13-202ENST00000366662 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
TTC13-202ENST00000366662 MT1MQ8N339 61 aa5.61□□□□□ -1.51
TTC13-202ENST00000366662 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
TTC13-202ENST00000366662 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
TTC13-202ENST00000366662 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.53
TTC13-202ENST00000366662 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
TTC13-202ENST00000366662 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
TTC13-202ENST00000366662 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
TTC13-202ENST00000366662 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
TTC13-202ENST00000366662 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
TTC13-202ENST00000366662 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
TTC13-202ENST00000366662 SPRR2EP22531 72 aa5.15□□□□□ -1.59
TTC13-202ENST00000366662 SPRR2BP35325 72 aa5.15□□□□□ -1.59
TTC13-202ENST00000366662 SPRR2AP35326 72 aa5.15□□□□□ -1.59
TTC13-202ENST00000366662 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
TTC13-202ENST00000366662 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
TTC13-202ENST00000366662 MT1AP04731 61 aa4.92□□□□□ -1.62
TTC13-202ENST00000366662 SPRR2DP22532 72 aa4.9□□□□□ -1.62
TTC13-202ENST00000366662 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
TTC13-202ENST00000366662 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
TTC13-202ENST00000366662 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
TTC13-202ENST00000366662 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
TTC13-202ENST00000366662 PRM1P04553 51 aa4.73□□□□□ -1.65
TTC13-202ENST00000366662 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
TTC13-202ENST00000366662 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
TTC13-202ENST00000366662 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
TTC13-202ENST00000366662 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
TTC13-202ENST00000366662 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
TTC13-202ENST00000366662 NEBP20929 6669 aa4.53□□□□□ -1.68
TTC13-202ENST00000366662 MT4P47944 62 aa4.48□□□□□ -1.69
TTC13-202ENST00000366662 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.69
TTC13-202ENST00000366662 MT3P25713 68 aa4.44□□□□□ -1.7
TTC13-202ENST00000366662 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
TTC13-202ENST00000366662 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
TTC13-202ENST00000366662 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
TTC13-202ENST00000366662 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
TTC13-202ENST00000366662 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
TTC13-202ENST00000366662 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
TTC13-202ENST00000366662 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
TTC13-202ENST00000366662 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
TTC13-202ENST00000366662 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
TTC13-202ENST00000366662 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
TTC13-202ENST00000366662 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
TTC13-202ENST00000366662 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
TTC13-202ENST00000366662 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
TTC13-202ENST00000366662 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
TTC13-202ENST00000366662 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
TTC13-202ENST00000366662 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
TTC13-202ENST00000366662 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
TTC13-202ENST00000366662 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
TTC13-202ENST00000366662 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
TTC13-202ENST00000366662 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
TTC13-202ENST00000366662 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
TTC13-202ENST00000366662 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
TTC13-202ENST00000366662 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
TTC13-202ENST00000366662 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
TTC13-202ENST00000366662 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
TTC13-202ENST00000366662 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
TTC13-202ENST00000366662 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
TTC13-202ENST00000366662 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.92
TTC13-202ENST00000366662 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
TTC13-202ENST00000366662 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
TTC13-202ENST00000366662 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
TTC13-202ENST00000366662 PHGR1C9JFL3 82 aa2.57□□□□□ -2
TTC13-202ENST00000366662 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
TTC13-202ENST00000366662 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 141.7 ms