RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 PET100P0DJ07 73 aa-3.17□□□□□ -2.92
RNU6-228P-201ENST00000362700 HYPKQ9NX55 129 aa-3.17□□□□□ -2.92
RNU6-228P-201ENST00000362700 S100A9P06702 114 aaKnown RBP-3.18□□□□□ -2.92
RNU6-228P-201ENST00000362700 DR1Q01658 176 aa-3.18□□□□□ -2.92
RNU6-228P-201ENST00000362700 COL5A1-AS1Q5SY13 56 aa-3.18□□□□□ -2.92
RNU6-228P-201ENST00000362700 ARHGAP5-AS1Q96IT6 56 aa-3.18□□□□□ -2.92
RNU6-228P-201ENST00000362700 GNGT2O14610 69 aa-3.19□□□□□ -2.92
RNU6-228P-201ENST00000362700 CCDC172P0C7W6 258 aa-3.19□□□□□ -2.92
RNU6-228P-201ENST00000362700 LINC00643Q86TS7 51 aa-3.19□□□□□ -2.92
RNU6-228P-201ENST00000362700 RWDD1Q9H446 243 aaPredicted RBP-3.19□□□□□ -2.92
RNU6-228P-201ENST00000362700 ARPC4P59998 168 aa-3.2□□□□□ -2.92
RNU6-228P-201ENST00000362700 C9orf16Q9BUW7 83 aa-3.2□□□□□ -2.92
RNU6-228P-201ENST00000362700 K7ERU9 68 aa-3.21□□□□□ -2.92
RNU6-228P-201ENST00000362700 CTXN2P0C2S0 81 aa-3.21□□□□□ -2.92
RNU6-228P-201ENST00000362700 FAUP35544 74 aaKnown RBP-3.21□□□□□ -2.92
RNU6-228P-201ENST00000362700 ATP5IP56385 69 aaPredicted RBP-3.22□□□□□ -2.92
RNU6-228P-201ENST00000362700 SNRPFP62306 86 aaKnown RBP-3.22□□□□□ -2.92
RNU6-228P-201ENST00000362700 SMIM15Q7Z3B0 74 aa-3.22□□□□□ -2.92
RNU6-228P-201ENST00000362700 SIKE1Q9BRV8 207 aa-3.22□□□□□ -2.92
RNU6-228P-201ENST00000362700 GNG10P50151 68 aa-3.23□□□□□ -2.93
RNU6-228P-201ENST00000362700 SVBPQ8N300 66 aa-3.23□□□□□ -2.93
RNU6-228P-201ENST00000362700 TCEAL7Q9BRU2 100 aa-3.23□□□□□ -2.93
RNU6-228P-201ENST00000362700 LINC01549A6NIU2 74 aa-3.25□□□□□ -2.93
RNU6-228P-201ENST00000362700 TRIQKQ629K1 86 aa-3.25□□□□□ -2.93
RNU6-228P-201ENST00000362700 SNRPGP15A8MWD9 76 aa-3.26□□□□□ -2.93
RNU6-228P-201ENST00000362700 SPA17Q15506 151 aa-3.26□□□□□ -2.93
RNU6-228P-201ENST00000362700 MORN2Q502X0 79 aa-3.26□□□□□ -2.93
RNU6-228P-201ENST00000362700 AIF1LQ9BQI0 150 aa-3.26□□□□□ -2.93
RNU6-228P-201ENST00000362700 CCL7P80098 99 aa-3.27□□□□□ -2.93
RNU6-228P-201ENST00000362700 LINC00523Q86TU6 105 aa-3.27□□□□□ -2.93
RNU6-228P-201ENST00000362700 SMIM3Q9BZL3 60 aa-3.27□□□□□ -2.93
RNU6-228P-201ENST00000362700 CORTO00230 105 aa-3.28□□□□□ -2.93
RNU6-228P-201ENST00000362700 DLEU1O43261 78 aa-3.28□□□□□ -2.93
RNU6-228P-201ENST00000362700 GNG3P63215 75 aa-3.28□□□□□ -2.93
RNU6-228P-201ENST00000362700 GCC2Q8IWJ2 1684 aa-3.28□□□□□ -2.93
RNU6-228P-201ENST00000362700 E5RI56 91 aa-3.3□□□□□ -2.94
RNU6-228P-201ENST00000362700 GNG13Q9P2W3 67 aa-3.3□□□□□ -2.94
RNU6-228P-201ENST00000362700 KANTRA0A1W2PQU2 76 aa-3.31□□□□□ -2.94
RNU6-228P-201ENST00000362700 PPP3R1P63098 170 aa-3.32□□□□□ -2.94
RNU6-228P-201ENST00000362700 RPL39P5Q59GN2 51 aa-3.32□□□□□ -2.94
RNU6-228P-201ENST00000362700 FAM25AB3EWG3 89 aa-3.33□□□□□ -2.94
RNU6-228P-201ENST00000362700 FAM25CB3EWG5 89 aa-3.33□□□□□ -2.94
RNU6-228P-201ENST00000362700 FAM25GB3EWG6 89 aa-3.33□□□□□ -2.94
RNU6-228P-201ENST00000362700 FANCD2Q9BXW9 1451 aa-3.34□□□□□ -2.94
RNU6-228P-201ENST00000362700 AKAIN1P0CW23 69 aa-3.34□□□□□ -2.94
RNU6-228P-201ENST00000362700 SMCO4Q9NRQ5 59 aa-3.36□□□□□ -2.95
RNU6-228P-201ENST00000362700 TPM2P07951 284 aa-3.38□□□□□ -2.95
RNU6-228P-201ENST00000362700 TPM1P09493 284 aa-3.38□□□□□ -2.95
RNU6-228P-201ENST00000362700 S100A16Q96FQ6 103 aaKnown RBP-3.39□□□□□ -2.95
RNU6-228P-201ENST00000362700 SNRPGP62308 76 aaKnown RBP-3.41□□□□□ -2.96
RNU6-228P-201ENST00000362700 GNG4P50150 75 aa-3.43□□□□□ -2.96
RNU6-228P-201ENST00000362700 GTF2H5Q6ZYL4 71 aa-3.43□□□□□ -2.96
RNU6-228P-201ENST00000362700 CMC2Q9NRP2 79 aa-3.44□□□□□ -2.96
RNU6-228P-201ENST00000362700 PYY3Q5JQD4 70 aa-3.46□□□□□ -2.96
RNU6-228P-201ENST00000362700 HSBP1L1C9JCN9 74 aa-3.47□□□□□ -2.96
RNU6-228P-201ENST00000362700 HOPXQ9BPY8 73 aaPredicted RBP-3.49□□□□□ -2.97
RNU6-228P-201ENST00000362700 V9GYS6 101 aa-3.5□□□□□ -2.97
RNU6-228P-201ENST00000362700 STMN1P16949 149 aa-3.51□□□□□ -2.97
RNU6-228P-201ENST00000362700 ADIRFQ15847 76 aa-3.51□□□□□ -2.97
RNU6-228P-201ENST00000362700 C18orf32Q8TCD1 76 aa-3.51□□□□□ -2.97
RNU6-228P-201ENST00000362700 C14orf144Q96I85 54 aa-3.52□□□□□ -2.97
RNU6-228P-201ENST00000362700 CHMP6Q96FZ7 201 aa-3.53□□□□□ -2.97
RNU6-228P-201ENST00000362700 Q9H521 79 aa-3.54□□□□□ -2.98
RNU6-228P-201ENST00000362700 M0R143 59 aa-3.55□□□□□ -2.98
RNU6-228P-201ENST00000362700 S100A13Q99584 98 aa-3.57□□□□□ -2.98
RNU6-228P-201ENST00000362700 A0A1B0GV90 55 aa-3.66□□□□□ -3
RNU6-228P-201ENST00000362700 TPM3P06753 285 aa-3.67□□□□□ -3
RNU6-228P-201ENST00000362700 GNG2P59768 71 aa-3.68□□□□□ -3
RNU6-228P-201ENST00000362700 GNG8Q9UK08 70 aa-3.68□□□□□ -3
RNU6-228P-201ENST00000362700 EFCAB10A6NFE3 127 aa-3.69□□□□□ -3
RNU6-228P-201ENST00000362700 GNG14A0A1W2PPG7 69 aa-3.71□□□□□ -3
RNU6-228P-201ENST00000362700 SMIM5Q71RC9 77 aa-3.71□□□□□ -3
RNU6-228P-201ENST00000362700 PTMAP06454 111 aaKnown RBP-3.8□□□□□ -3.02
RNU6-228P-201ENST00000362700 SMIM31A0A1B0GVY4 71 aa-3.88□□□□□ -3.03
RNU6-228P-201ENST00000362700 TOMM5Q8N4H5 51 aa-3.94□□□□□ -3.04
RNU6-228P-201ENST00000362700 LOC105371267A0A1B0GV96 52 aa-4.11□□□□□ -3.07
RNU6-228P-201ENST00000362700 PTMSP20962 102 aa-4.65□□□□□ -3.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms