RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
SNX6-201ENST00000362031 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
SNX6-201ENST00000362031 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
SNX6-201ENST00000362031 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
SNX6-201ENST00000362031 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
SNX6-201ENST00000362031 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
SNX6-201ENST00000362031 TNP1P09430 55 aa4.15□□□□□ -1.75
SNX6-201ENST00000362031 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
SNX6-201ENST00000362031 INE1O15225 51 aa4.11□□□□□ -1.75
SNX6-201ENST00000362031 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
SNX6-201ENST00000362031 KRTAP6-3Q3LI67 103 aa4.08□□□□□ -1.76
SNX6-201ENST00000362031 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
SNX6-201ENST00000362031 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
SNX6-201ENST00000362031 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
SNX6-201ENST00000362031 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
SNX6-201ENST00000362031 NEBP20929 6669 aa4.04□□□□□ -1.76
SNX6-201ENST00000362031 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
SNX6-201ENST00000362031 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
SNX6-201ENST00000362031 MT1EP04732 61 aa3.97□□□□□ -1.77
SNX6-201ENST00000362031 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
SNX6-201ENST00000362031 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SNX6-201ENST00000362031 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
SNX6-201ENST00000362031 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
SNX6-201ENST00000362031 SPRR2EP22531 72 aa3.88□□□□□ -1.79
SNX6-201ENST00000362031 SPRR2BP35325 72 aa3.88□□□□□ -1.79
SNX6-201ENST00000362031 SPRR2AP35326 72 aa3.88□□□□□ -1.79
SNX6-201ENST00000362031 MT1LQ93083 61 aa3.85□□□□□ -1.79
SNX6-201ENST00000362031 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
SNX6-201ENST00000362031 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
SNX6-201ENST00000362031 MT1GP13640 62 aa3.76□□□□□ -1.81
SNX6-201ENST00000362031 MT1MQ8N339 61 aa3.75□□□□□ -1.81
SNX6-201ENST00000362031 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
SNX6-201ENST00000362031 SPRR2DP22532 72 aa3.73□□□□□ -1.81
SNX6-201ENST00000362031 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
SNX6-201ENST00000362031 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
SNX6-201ENST00000362031 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
SNX6-201ENST00000362031 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
SNX6-201ENST00000362031 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
SNX6-201ENST00000362031 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
SNX6-201ENST00000362031 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
SNX6-201ENST00000362031 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
SNX6-201ENST00000362031 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
SNX6-201ENST00000362031 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
SNX6-201ENST00000362031 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
SNX6-201ENST00000362031 MT4P47944 62 aa3.29□□□□□ -1.88
SNX6-201ENST00000362031 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
SNX6-201ENST00000362031 MT1AP04731 61 aa3.24□□□□□ -1.89
SNX6-201ENST00000362031 KRTAP12-4P60329 112 aa3.15□□□□□ -1.9
SNX6-201ENST00000362031 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
SNX6-201ENST00000362031 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
SNX6-201ENST00000362031 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
SNX6-201ENST00000362031 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
SNX6-201ENST00000362031 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
SNX6-201ENST00000362031 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
SNX6-201ENST00000362031 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
SNX6-201ENST00000362031 MT3P25713 68 aa2.93□□□□□ -1.94
SNX6-201ENST00000362031 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
SNX6-201ENST00000362031 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
SNX6-201ENST00000362031 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
SNX6-201ENST00000362031 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
SNX6-201ENST00000362031 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
SNX6-201ENST00000362031 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
SNX6-201ENST00000362031 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
SNX6-201ENST00000362031 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
SNX6-201ENST00000362031 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
SNX6-201ENST00000362031 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
SNX6-201ENST00000362031 PRM1P04553 51 aa2.52□□□□□ -2.01
SNX6-201ENST00000362031 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
SNX6-201ENST00000362031 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
SNX6-201ENST00000362031 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SNX6-201ENST00000362031 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
SNX6-201ENST00000362031 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
SNX6-201ENST00000362031 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SNX6-201ENST00000362031 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
SNX6-201ENST00000362031 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SNX6-201ENST00000362031 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
SNX6-201ENST00000362031 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 75.1 ms