RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
SGMS1-202ENST00000361781 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
SGMS1-202ENST00000361781 MT1LQ93083 61 aa4.56□□□□□ -1.68
SGMS1-202ENST00000361781 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
SGMS1-202ENST00000361781 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
SGMS1-202ENST00000361781 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
SGMS1-202ENST00000361781 MT1EP04732 61 aa4.51□□□□□ -1.69
SGMS1-202ENST00000361781 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
SGMS1-202ENST00000361781 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
SGMS1-202ENST00000361781 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
SGMS1-202ENST00000361781 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
SGMS1-202ENST00000361781 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
SGMS1-202ENST00000361781 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
SGMS1-202ENST00000361781 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
SGMS1-202ENST00000361781 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
SGMS1-202ENST00000361781 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
SGMS1-202ENST00000361781 MT1MQ8N339 61 aa4.27□□□□□ -1.73
SGMS1-202ENST00000361781 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
SGMS1-202ENST00000361781 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
SGMS1-202ENST00000361781 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
SGMS1-202ENST00000361781 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
SGMS1-202ENST00000361781 PRM1P04553 51 aa4.04□□□□□ -1.76
SGMS1-202ENST00000361781 SPRR2EP22531 72 aa4.04□□□□□ -1.76
SGMS1-202ENST00000361781 SPRR2BP35325 72 aa4.04□□□□□ -1.76
SGMS1-202ENST00000361781 SPRR2AP35326 72 aa4.04□□□□□ -1.76
SGMS1-202ENST00000361781 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
SGMS1-202ENST00000361781 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
SGMS1-202ENST00000361781 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
SGMS1-202ENST00000361781 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
SGMS1-202ENST00000361781 SPRR2DP22532 72 aa3.84□□□□□ -1.8
SGMS1-202ENST00000361781 MT1AP04731 61 aa3.82□□□□□ -1.8
SGMS1-202ENST00000361781 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
SGMS1-202ENST00000361781 MT3P25713 68 aa3.68□□□□□ -1.82
SGMS1-202ENST00000361781 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
SGMS1-202ENST00000361781 MT4P47944 62 aa3.6□□□□□ -1.83
SGMS1-202ENST00000361781 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
SGMS1-202ENST00000361781 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
SGMS1-202ENST00000361781 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
SGMS1-202ENST00000361781 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
SGMS1-202ENST00000361781 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.85
SGMS1-202ENST00000361781 LCE1DQ5T752 114 aa3.46□□□□□ -1.85
SGMS1-202ENST00000361781 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
SGMS1-202ENST00000361781 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
SGMS1-202ENST00000361781 NEBP20929 6669 aa3.37□□□□□ -1.87
SGMS1-202ENST00000361781 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
SGMS1-202ENST00000361781 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
SGMS1-202ENST00000361781 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
SGMS1-202ENST00000361781 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
SGMS1-202ENST00000361781 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
SGMS1-202ENST00000361781 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
SGMS1-202ENST00000361781 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
SGMS1-202ENST00000361781 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
SGMS1-202ENST00000361781 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
SGMS1-202ENST00000361781 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
SGMS1-202ENST00000361781 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
SGMS1-202ENST00000361781 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
SGMS1-202ENST00000361781 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SGMS1-202ENST00000361781 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
SGMS1-202ENST00000361781 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
SGMS1-202ENST00000361781 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SGMS1-202ENST00000361781 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
SGMS1-202ENST00000361781 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
SGMS1-202ENST00000361781 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
SGMS1-202ENST00000361781 LCE1CQ5T751 118 aa2.54□□□□□ -2
SGMS1-202ENST00000361781 LCE1FQ5T754 118 aa2.54□□□□□ -2
SGMS1-202ENST00000361781 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
SGMS1-202ENST00000361781 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
SGMS1-202ENST00000361781 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SGMS1-202ENST00000361781 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
SGMS1-202ENST00000361781 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SGMS1-202ENST00000361781 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SGMS1-202ENST00000361781 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
SGMS1-202ENST00000361781 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
SGMS1-202ENST00000361781 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
SGMS1-202ENST00000361781 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.12
SGMS1-202ENST00000361781 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
SGMS1-202ENST00000361781 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms