RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
TOP1-201ENST00000361337 SSPOA2VEC9 5147 aa3.4□□□□□ -1.86
TOP1-201ENST00000361337 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
TOP1-201ENST00000361337 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
TOP1-201ENST00000361337 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
TOP1-201ENST00000361337 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
TOP1-201ENST00000361337 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
TOP1-201ENST00000361337 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
TOP1-201ENST00000361337 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
TOP1-201ENST00000361337 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
TOP1-201ENST00000361337 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
TOP1-201ENST00000361337 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
TOP1-201ENST00000361337 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
TOP1-201ENST00000361337 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
TOP1-201ENST00000361337 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
TOP1-201ENST00000361337 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
TOP1-201ENST00000361337 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
TOP1-201ENST00000361337 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
TOP1-201ENST00000361337 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
TOP1-201ENST00000361337 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
TOP1-201ENST00000361337 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
TOP1-201ENST00000361337 SPRR2EP22531 72 aa3.1□□□□□ -1.91
TOP1-201ENST00000361337 SPRR2BP35325 72 aa3.1□□□□□ -1.91
TOP1-201ENST00000361337 SPRR2AP35326 72 aa3.1□□□□□ -1.91
TOP1-201ENST00000361337 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
TOP1-201ENST00000361337 MT1GP13640 62 aa3.07□□□□□ -1.92
TOP1-201ENST00000361337 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
TOP1-201ENST00000361337 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
TOP1-201ENST00000361337 MT1EP04732 61 aa3.04□□□□□ -1.92
TOP1-201ENST00000361337 MT1LQ93083 61 aa3.04□□□□□ -1.92
TOP1-201ENST00000361337 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
TOP1-201ENST00000361337 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
TOP1-201ENST00000361337 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
TOP1-201ENST00000361337 SPRR2DP22532 72 aa2.95□□□□□ -1.94
TOP1-201ENST00000361337 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
TOP1-201ENST00000361337 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.94
TOP1-201ENST00000361337 MT1MQ8N339 61 aa2.9□□□□□ -1.94
TOP1-201ENST00000361337 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
TOP1-201ENST00000361337 PRM1P04553 51 aa2.83□□□□□ -1.96
TOP1-201ENST00000361337 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
TOP1-201ENST00000361337 MT4P47944 62 aa2.77□□□□□ -1.97
TOP1-201ENST00000361337 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
TOP1-201ENST00000361337 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
TOP1-201ENST00000361337 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.97
TOP1-201ENST00000361337 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
TOP1-201ENST00000361337 NEBP20929 6669 aa2.67□□□□□ -1.98
TOP1-201ENST00000361337 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.98
TOP1-201ENST00000361337 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
TOP1-201ENST00000361337 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
TOP1-201ENST00000361337 MT1AP04731 61 aa2.55□□□□□ -2
TOP1-201ENST00000361337 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
TOP1-201ENST00000361337 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
TOP1-201ENST00000361337 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
TOP1-201ENST00000361337 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
TOP1-201ENST00000361337 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
TOP1-201ENST00000361337 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
TOP1-201ENST00000361337 MT3P25713 68 aa2.43□□□□□ -2.02
TOP1-201ENST00000361337 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
TOP1-201ENST00000361337 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
TOP1-201ENST00000361337 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
TOP1-201ENST00000361337 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.04
TOP1-201ENST00000361337 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
TOP1-201ENST00000361337 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
TOP1-201ENST00000361337 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
TOP1-201ENST00000361337 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
TOP1-201ENST00000361337 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
TOP1-201ENST00000361337 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
TOP1-201ENST00000361337 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
TOP1-201ENST00000361337 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
TOP1-201ENST00000361337 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
TOP1-201ENST00000361337 KRTAP5-8O75690 187 aa1.9□□□□□ -2.1
TOP1-201ENST00000361337 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
TOP1-201ENST00000361337 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
TOP1-201ENST00000361337 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
TOP1-201ENST00000361337 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
TOP1-201ENST00000361337 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
TOP1-201ENST00000361337 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 102 ms