RNA–Protein interactions for RNA: ENST00000360954.2

HS3ST3B1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST3B1, Length 5,367 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3B1-201ENST00000360954 EPPK1P58107 5090 aaKnown RBP5□□□□□ -1.61
HS3ST3B1-201ENST00000360954 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
HS3ST3B1-201ENST00000360954 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
HS3ST3B1-201ENST00000360954 KRTAP9-2Q9BYQ4 174 aa4.91□□□□□ -1.62
HS3ST3B1-201ENST00000360954 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
HS3ST3B1-201ENST00000360954 MT1AP04731 61 aa4.86□□□□□ -1.63
HS3ST3B1-201ENST00000360954 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
HS3ST3B1-201ENST00000360954 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
HS3ST3B1-201ENST00000360954 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
HS3ST3B1-201ENST00000360954 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
HS3ST3B1-201ENST00000360954 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
HS3ST3B1-201ENST00000360954 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.65
HS3ST3B1-201ENST00000360954 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
HS3ST3B1-201ENST00000360954 HMCN2Q8NDA2 5059 aa4.74□□□□□ -1.65
HS3ST3B1-201ENST00000360954 MT4P47944 62 aa4.73□□□□□ -1.65
HS3ST3B1-201ENST00000360954 PRM1P04553 51 aa4.73□□□□□ -1.65
HS3ST3B1-201ENST00000360954 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
HS3ST3B1-201ENST00000360954 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.66
HS3ST3B1-201ENST00000360954 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
HS3ST3B1-201ENST00000360954 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
HS3ST3B1-201ENST00000360954 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
HS3ST3B1-201ENST00000360954 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
HS3ST3B1-201ENST00000360954 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
HS3ST3B1-201ENST00000360954 MUC2Q02817 5179 aa4.48□□□□□ -1.69
HS3ST3B1-201ENST00000360954 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
HS3ST3B1-201ENST00000360954 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
HS3ST3B1-201ENST00000360954 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
HS3ST3B1-201ENST00000360954 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
HS3ST3B1-201ENST00000360954 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
HS3ST3B1-201ENST00000360954 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
HS3ST3B1-201ENST00000360954 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
HS3ST3B1-201ENST00000360954 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
HS3ST3B1-201ENST00000360954 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
HS3ST3B1-201ENST00000360954 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
HS3ST3B1-201ENST00000360954 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
HS3ST3B1-201ENST00000360954 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
HS3ST3B1-201ENST00000360954 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
HS3ST3B1-201ENST00000360954 USH2AO75445 5202 aa4.02□□□□□ -1.77
HS3ST3B1-201ENST00000360954 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
HS3ST3B1-201ENST00000360954 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
HS3ST3B1-201ENST00000360954 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
HS3ST3B1-201ENST00000360954 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
HS3ST3B1-201ENST00000360954 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
HS3ST3B1-201ENST00000360954 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
HS3ST3B1-201ENST00000360954 KMT2DO14686 5537 aa3.79□□□□□ -1.8
HS3ST3B1-201ENST00000360954 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
HS3ST3B1-201ENST00000360954 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
HS3ST3B1-201ENST00000360954 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
HS3ST3B1-201ENST00000360954 NEBP20929 6669 aa3.67□□□□□ -1.82
HS3ST3B1-201ENST00000360954 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
HS3ST3B1-201ENST00000360954 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
HS3ST3B1-201ENST00000360954 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.84
HS3ST3B1-201ENST00000360954 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
HS3ST3B1-201ENST00000360954 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
HS3ST3B1-201ENST00000360954 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
HS3ST3B1-201ENST00000360954 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
HS3ST3B1-201ENST00000360954 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
HS3ST3B1-201ENST00000360954 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
HS3ST3B1-201ENST00000360954 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
HS3ST3B1-201ENST00000360954 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
HS3ST3B1-201ENST00000360954 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
HS3ST3B1-201ENST00000360954 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
HS3ST3B1-201ENST00000360954 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
HS3ST3B1-201ENST00000360954 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
HS3ST3B1-201ENST00000360954 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
HS3ST3B1-201ENST00000360954 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
HS3ST3B1-201ENST00000360954 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
HS3ST3B1-201ENST00000360954 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
HS3ST3B1-201ENST00000360954 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
HS3ST3B1-201ENST00000360954 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
HS3ST3B1-201ENST00000360954 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
HS3ST3B1-201ENST00000360954 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.04
HS3ST3B1-201ENST00000360954 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
HS3ST3B1-201ENST00000360954 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
HS3ST3B1-201ENST00000360954 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
HS3ST3B1-201ENST00000360954 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
HS3ST3B1-201ENST00000360954 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms