RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
PCMTD1-201ENST00000360540 SPRR2EP22531 72 aa4.67□□□□□ -1.66
PCMTD1-201ENST00000360540 SPRR2BP35325 72 aa4.67□□□□□ -1.66
PCMTD1-201ENST00000360540 SPRR2AP35326 72 aa4.67□□□□□ -1.66
PCMTD1-201ENST00000360540 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.66
PCMTD1-201ENST00000360540 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
PCMTD1-201ENST00000360540 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
PCMTD1-201ENST00000360540 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
PCMTD1-201ENST00000360540 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
PCMTD1-201ENST00000360540 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
PCMTD1-201ENST00000360540 MT1MQ8N339 61 aa4.49□□□□□ -1.69
PCMTD1-201ENST00000360540 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
PCMTD1-201ENST00000360540 SPRR2DP22532 72 aa4.46□□□□□ -1.69
PCMTD1-201ENST00000360540 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
PCMTD1-201ENST00000360540 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
PCMTD1-201ENST00000360540 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
PCMTD1-201ENST00000360540 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.72
PCMTD1-201ENST00000360540 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.72
PCMTD1-201ENST00000360540 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
PCMTD1-201ENST00000360540 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
PCMTD1-201ENST00000360540 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
PCMTD1-201ENST00000360540 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
PCMTD1-201ENST00000360540 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
PCMTD1-201ENST00000360540 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
PCMTD1-201ENST00000360540 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.74
PCMTD1-201ENST00000360540 MT4P47944 62 aa4.14□□□□□ -1.75
PCMTD1-201ENST00000360540 PRM1P04553 51 aa4.09□□□□□ -1.76
PCMTD1-201ENST00000360540 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
PCMTD1-201ENST00000360540 MT3P25713 68 aa4.03□□□□□ -1.76
PCMTD1-201ENST00000360540 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
PCMTD1-201ENST00000360540 MT1AP04731 61 aa4.03□□□□□ -1.76
PCMTD1-201ENST00000360540 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
PCMTD1-201ENST00000360540 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
PCMTD1-201ENST00000360540 MDN1Q9NU22 5596 aa3.9□□□□□ -1.78
PCMTD1-201ENST00000360540 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
PCMTD1-201ENST00000360540 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
PCMTD1-201ENST00000360540 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
PCMTD1-201ENST00000360540 KRTAP9-7A8MTY7 169 aa3.81□□□□□ -1.8
PCMTD1-201ENST00000360540 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
PCMTD1-201ENST00000360540 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
PCMTD1-201ENST00000360540 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
PCMTD1-201ENST00000360540 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
PCMTD1-201ENST00000360540 NEBP20929 6669 aa3.51□□□□□ -1.85
PCMTD1-201ENST00000360540 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
PCMTD1-201ENST00000360540 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
PCMTD1-201ENST00000360540 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
PCMTD1-201ENST00000360540 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
PCMTD1-201ENST00000360540 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
PCMTD1-201ENST00000360540 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
PCMTD1-201ENST00000360540 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
PCMTD1-201ENST00000360540 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
PCMTD1-201ENST00000360540 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
PCMTD1-201ENST00000360540 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
PCMTD1-201ENST00000360540 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
PCMTD1-201ENST00000360540 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
PCMTD1-201ENST00000360540 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
PCMTD1-201ENST00000360540 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
PCMTD1-201ENST00000360540 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
PCMTD1-201ENST00000360540 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
PCMTD1-201ENST00000360540 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
PCMTD1-201ENST00000360540 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
PCMTD1-201ENST00000360540 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
PCMTD1-201ENST00000360540 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
PCMTD1-201ENST00000360540 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
PCMTD1-201ENST00000360540 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
PCMTD1-201ENST00000360540 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
PCMTD1-201ENST00000360540 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PCMTD1-201ENST00000360540 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
PCMTD1-201ENST00000360540 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
PCMTD1-201ENST00000360540 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
PCMTD1-201ENST00000360540 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
PCMTD1-201ENST00000360540 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
PCMTD1-201ENST00000360540 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
PCMTD1-201ENST00000360540 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
PCMTD1-201ENST00000360540 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
PCMTD1-201ENST00000360540 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
PCMTD1-201ENST00000360540 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 123.3 ms