RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
RAB5B-201ENST00000360299 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
RAB5B-201ENST00000360299 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
RAB5B-201ENST00000360299 KMT2DO14686 5537 aa2.51□□□□□ -2.01
RAB5B-201ENST00000360299 LCE3BQ5TA77 95 aa2.49□□□□□ -2.01
RAB5B-201ENST00000360299 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
RAB5B-201ENST00000360299 MT1GP13640 62 aa2.47□□□□□ -2.01
RAB5B-201ENST00000360299 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
RAB5B-201ENST00000360299 MT4P47944 62 aa2.46□□□□□ -2.02
RAB5B-201ENST00000360299 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
RAB5B-201ENST00000360299 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
RAB5B-201ENST00000360299 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
RAB5B-201ENST00000360299 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
RAB5B-201ENST00000360299 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
RAB5B-201ENST00000360299 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
RAB5B-201ENST00000360299 MT1LQ93083 61 aa2.35□□□□□ -2.03
RAB5B-201ENST00000360299 MT1EP04732 61 aa2.35□□□□□ -2.03
RAB5B-201ENST00000360299 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
RAB5B-201ENST00000360299 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
RAB5B-201ENST00000360299 KRTAP2-1Q9BYU5 128 aa2.32□□□□□ -2.04
RAB5B-201ENST00000360299 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
RAB5B-201ENST00000360299 KRTAP4-9Q9BYQ8 210 aa2.29□□□□□ -2.04
RAB5B-201ENST00000360299 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.04
RAB5B-201ENST00000360299 KRTAP4-7Q9BYR0 210 aa2.28□□□□□ -2.04
RAB5B-201ENST00000360299 MT1MQ8N339 61 aa2.27□□□□□ -2.05
RAB5B-201ENST00000360299 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
RAB5B-201ENST00000360299 NEBP20929 6669 aa2.25□□□□□ -2.05
RAB5B-201ENST00000360299 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
RAB5B-201ENST00000360299 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
RAB5B-201ENST00000360299 LCE1AQ5T7P2 110 aa2.24□□□□□ -2.05
RAB5B-201ENST00000360299 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
RAB5B-201ENST00000360299 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
RAB5B-201ENST00000360299 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
RAB5B-201ENST00000360299 LOC100996750A0A140TA64 210 aa2.16□□□□□ -2.06
RAB5B-201ENST00000360299 MT3P25713 68 aa2.15□□□□□ -2.06
RAB5B-201ENST00000360299 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
RAB5B-201ENST00000360299 MT1AP04731 61 aa2.11□□□□□ -2.07
RAB5B-201ENST00000360299 LCE1DQ5T752 114 aa2.11□□□□□ -2.07
RAB5B-201ENST00000360299 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
RAB5B-201ENST00000360299 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
RAB5B-201ENST00000360299 KRTAP5-9P26371 169 aa2.09□□□□□ -2.08
RAB5B-201ENST00000360299 LCE5AQ5TCM9 118 aa2.09□□□□□ -2.08
RAB5B-201ENST00000360299 MDN1Q9NU22 5596 aa2□□□□□ -2.09
RAB5B-201ENST00000360299 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
RAB5B-201ENST00000360299 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
RAB5B-201ENST00000360299 KRTAP9-4Q9BYQ2 154 aa1.94□□□□□ -2.1
RAB5B-201ENST00000360299 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
RAB5B-201ENST00000360299 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
RAB5B-201ENST00000360299 PRM1P04553 51 aa1.91□□□□□ -2.1
RAB5B-201ENST00000360299 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
RAB5B-201ENST00000360299 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
RAB5B-201ENST00000360299 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
RAB5B-201ENST00000360299 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
RAB5B-201ENST00000360299 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
RAB5B-201ENST00000360299 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
RAB5B-201ENST00000360299 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
RAB5B-201ENST00000360299 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
RAB5B-201ENST00000360299 KRTAP4-11Q9BYQ6 195 aa1.71□□□□□ -2.14
RAB5B-201ENST00000360299 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
RAB5B-201ENST00000360299 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
RAB5B-201ENST00000360299 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
RAB5B-201ENST00000360299 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
RAB5B-201ENST00000360299 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
RAB5B-201ENST00000360299 MUC5ACP98088 5654 aa1.53□□□□□ -2.17
RAB5B-201ENST00000360299 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
RAB5B-201ENST00000360299 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
RAB5B-201ENST00000360299 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
RAB5B-201ENST00000360299 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
RAB5B-201ENST00000360299 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
RAB5B-201ENST00000360299 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
RAB5B-201ENST00000360299 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
RAB5B-201ENST00000360299 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
RAB5B-201ENST00000360299 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
RAB5B-201ENST00000360299 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
RAB5B-201ENST00000360299 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
RAB5B-201ENST00000360299 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
RAB5B-201ENST00000360299 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 108.6 ms