RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 USH2AO75445 5202 aa4.6□□□□□ -1.67
MACF1-202ENST00000360115 KMT2DO14686 5537 aa4.6□□□□□ -1.67
MACF1-202ENST00000360115 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
MACF1-202ENST00000360115 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
MACF1-202ENST00000360115 MT1LQ93083 61 aa4.56□□□□□ -1.68
MACF1-202ENST00000360115 MT1EP04732 61 aa4.53□□□□□ -1.68
MACF1-202ENST00000360115 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
MACF1-202ENST00000360115 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
MACF1-202ENST00000360115 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
MACF1-202ENST00000360115 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
MACF1-202ENST00000360115 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
MACF1-202ENST00000360115 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
MACF1-202ENST00000360115 MT1GP13640 62 aa4.24□□□□□ -1.73
MACF1-202ENST00000360115 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
MACF1-202ENST00000360115 MT1MQ8N339 61 aa4.21□□□□□ -1.74
MACF1-202ENST00000360115 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
MACF1-202ENST00000360115 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
MACF1-202ENST00000360115 NEBP20929 6669 aa4.14□□□□□ -1.75
MACF1-202ENST00000360115 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
MACF1-202ENST00000360115 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
MACF1-202ENST00000360115 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
MACF1-202ENST00000360115 MT1AP04731 61 aa3.98□□□□□ -1.77
MACF1-202ENST00000360115 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
MACF1-202ENST00000360115 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
MACF1-202ENST00000360115 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
MACF1-202ENST00000360115 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
MACF1-202ENST00000360115 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
MACF1-202ENST00000360115 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
MACF1-202ENST00000360115 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
MACF1-202ENST00000360115 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
MACF1-202ENST00000360115 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.8
MACF1-202ENST00000360115 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
MACF1-202ENST00000360115 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
MACF1-202ENST00000360115 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
MACF1-202ENST00000360115 SPRR2EP22531 72 aa3.77□□□□□ -1.81
MACF1-202ENST00000360115 SPRR2BP35325 72 aa3.77□□□□□ -1.81
MACF1-202ENST00000360115 SPRR2AP35326 72 aa3.77□□□□□ -1.81
MACF1-202ENST00000360115 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
MACF1-202ENST00000360115 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
MACF1-202ENST00000360115 PRM1P04553 51 aa3.73□□□□□ -1.81
MACF1-202ENST00000360115 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
MACF1-202ENST00000360115 SPRR2DP22532 72 aa3.65□□□□□ -1.83
MACF1-202ENST00000360115 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
MACF1-202ENST00000360115 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
MACF1-202ENST00000360115 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
MACF1-202ENST00000360115 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
MACF1-202ENST00000360115 MT3P25713 68 aa3.42□□□□□ -1.86
MACF1-202ENST00000360115 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
MACF1-202ENST00000360115 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
MACF1-202ENST00000360115 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
MACF1-202ENST00000360115 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
MACF1-202ENST00000360115 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
MACF1-202ENST00000360115 MT4P47944 62 aa3.22□□□□□ -1.89
MACF1-202ENST00000360115 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
MACF1-202ENST00000360115 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
MACF1-202ENST00000360115 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
MACF1-202ENST00000360115 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
MACF1-202ENST00000360115 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
MACF1-202ENST00000360115 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
MACF1-202ENST00000360115 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
MACF1-202ENST00000360115 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
MACF1-202ENST00000360115 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
MACF1-202ENST00000360115 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
MACF1-202ENST00000360115 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
MACF1-202ENST00000360115 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
MACF1-202ENST00000360115 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
MACF1-202ENST00000360115 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
MACF1-202ENST00000360115 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
MACF1-202ENST00000360115 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
MACF1-202ENST00000360115 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
MACF1-202ENST00000360115 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
MACF1-202ENST00000360115 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
MACF1-202ENST00000360115 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
MACF1-202ENST00000360115 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
MACF1-202ENST00000360115 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
MACF1-202ENST00000360115 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
MACF1-202ENST00000360115 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
MACF1-202ENST00000360115 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 341.9 ms