RNA–Protein interactions for RNA: ENST00000360110.8

TFRC-201, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,111 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-201ENST00000360110 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
TFRC-201ENST00000360110 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
TFRC-201ENST00000360110 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
TFRC-201ENST00000360110 MT1LQ93083 61 aa2.93□□□□□ -1.94
TFRC-201ENST00000360110 KRTAP9-6A0A140TA67 174 aa2.93□□□□□ -1.94
TFRC-201ENST00000360110 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
TFRC-201ENST00000360110 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
TFRC-201ENST00000360110 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
TFRC-201ENST00000360110 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
TFRC-201ENST00000360110 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
TFRC-201ENST00000360110 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
TFRC-201ENST00000360110 MT1EP04732 61 aa2.87□□□□□ -1.95
TFRC-201ENST00000360110 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
TFRC-201ENST00000360110 PRM1P04553 51 aa2.85□□□□□ -1.95
TFRC-201ENST00000360110 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
TFRC-201ENST00000360110 LCE2AQ5TA79 106 aaPredicted RBP2.83□□□□□ -1.96
TFRC-201ENST00000360110 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
TFRC-201ENST00000360110 LCE2DQ5TA82 110 aaPredicted RBP2.73□□□□□ -1.97
TFRC-201ENST00000360110 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
TFRC-201ENST00000360110 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
TFRC-201ENST00000360110 MT1MQ8N339 61 aa2.72□□□□□ -1.97
TFRC-201ENST00000360110 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
TFRC-201ENST00000360110 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
TFRC-201ENST00000360110 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
TFRC-201ENST00000360110 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
TFRC-201ENST00000360110 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
TFRC-201ENST00000360110 SPRR2EP22531 72 aa2.56□□□□□ -2
TFRC-201ENST00000360110 SPRR2BP35325 72 aa2.56□□□□□ -2
TFRC-201ENST00000360110 SPRR2AP35326 72 aa2.56□□□□□ -2
TFRC-201ENST00000360110 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
TFRC-201ENST00000360110 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
TFRC-201ENST00000360110 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
TFRC-201ENST00000360110 MT1AP04731 61 aa2.45□□□□□ -2.02
TFRC-201ENST00000360110 SPRR2DP22532 72 aa2.43□□□□□ -2.02
TFRC-201ENST00000360110 MT3P25713 68 aa2.39□□□□□ -2.03
TFRC-201ENST00000360110 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
TFRC-201ENST00000360110 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
TFRC-201ENST00000360110 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
TFRC-201ENST00000360110 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
TFRC-201ENST00000360110 MT4P47944 62 aa2.34□□□□□ -2.04
TFRC-201ENST00000360110 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.04
TFRC-201ENST00000360110 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
TFRC-201ENST00000360110 LCE1DQ5T752 114 aa2.31□□□□□ -2.04
TFRC-201ENST00000360110 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
TFRC-201ENST00000360110 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
TFRC-201ENST00000360110 NEBP20929 6669 aa2.28□□□□□ -2.04
TFRC-201ENST00000360110 KRTAP9-4Q9BYQ2 154 aa2.27□□□□□ -2.05
TFRC-201ENST00000360110 KRTAP4-6Q9BYQ5 205 aa2.23□□□□□ -2.05
TFRC-201ENST00000360110 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
TFRC-201ENST00000360110 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
TFRC-201ENST00000360110 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
TFRC-201ENST00000360110 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
TFRC-201ENST00000360110 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
TFRC-201ENST00000360110 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
TFRC-201ENST00000360110 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
TFRC-201ENST00000360110 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.12
TFRC-201ENST00000360110 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
TFRC-201ENST00000360110 LCE4AQ5TA78 99 aa1.79□□□□□ -2.12
TFRC-201ENST00000360110 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
TFRC-201ENST00000360110 KRTAP4-12Q9BQ66 201 aa1.76□□□□□ -2.13
TFRC-201ENST00000360110 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
TFRC-201ENST00000360110 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
TFRC-201ENST00000360110 KRTAP5-3Q6L8H2 238 aa1.73□□□□□ -2.13
TFRC-201ENST00000360110 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
TFRC-201ENST00000360110 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
TFRC-201ENST00000360110 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
TFRC-201ENST00000360110 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
TFRC-201ENST00000360110 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
TFRC-201ENST00000360110 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
TFRC-201ENST00000360110 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
TFRC-201ENST00000360110 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
TFRC-201ENST00000360110 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
TFRC-201ENST00000360110 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
TFRC-201ENST00000360110 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
TFRC-201ENST00000360110 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
TFRC-201ENST00000360110 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
TFRC-201ENST00000360110 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms