RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 KRTAP19-3Q7Z4W3 81 aa7.26□□□□□ -1.25
FAM3A-202ENST00000359889 MT1GP13640 62 aa7.23□□□□□ -1.25
FAM3A-202ENST00000359889 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
FAM3A-202ENST00000359889 KRTAP5-9P26371 169 aa7.15□□□□□ -1.27
FAM3A-202ENST00000359889 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
FAM3A-202ENST00000359889 MT1MQ8N339 61 aa7.11□□□□□ -1.27
FAM3A-202ENST00000359889 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
FAM3A-202ENST00000359889 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
FAM3A-202ENST00000359889 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
FAM3A-202ENST00000359889 KRTAP9-6A8MVA2 160 aa6.98□□□□□ -1.29
FAM3A-202ENST00000359889 KRTAP6-3Q3LI67 103 aa6.98□□□□□ -1.29
FAM3A-202ENST00000359889 LCE1AQ5T7P2 110 aa6.95□□□□□ -1.3
FAM3A-202ENST00000359889 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
FAM3A-202ENST00000359889 SPRR2EP22531 72 aa6.92□□□□□ -1.3
FAM3A-202ENST00000359889 SPRR2BP35325 72 aa6.92□□□□□ -1.3
FAM3A-202ENST00000359889 SPRR2AP35326 72 aa6.92□□□□□ -1.3
FAM3A-202ENST00000359889 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
FAM3A-202ENST00000359889 A0A0A0MQY5 61 aa6.76□□□□□ -1.33
FAM3A-202ENST00000359889 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
FAM3A-202ENST00000359889 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
FAM3A-202ENST00000359889 SPRR2DP22532 72 aa6.67□□□□□ -1.34
FAM3A-202ENST00000359889 KRTAP2-3P0C7H8 128 aa6.58□□□□□ -1.36
FAM3A-202ENST00000359889 KRTAP2-4Q9BYR9 128 aa6.58□□□□□ -1.36
FAM3A-202ENST00000359889 KRTAP2-1Q9BYU5 128 aa6.58□□□□□ -1.36
FAM3A-202ENST00000359889 DSTQ03001 7570 aaKnown RBP6.57□□□□□ -1.36
FAM3A-202ENST00000359889 NEBP20929 6669 aa6.48□□□□□ -1.37
FAM3A-202ENST00000359889 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
FAM3A-202ENST00000359889 KRTAP5-5Q701N2 237 aaPredicted RBP6.36□□□□□ -1.39
FAM3A-202ENST00000359889 MT1AP04731 61 aa6.33□□□□□ -1.4
FAM3A-202ENST00000359889 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
FAM3A-202ENST00000359889 INE1O15225 51 aa6.22□□□□□ -1.41
FAM3A-202ENST00000359889 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
FAM3A-202ENST00000359889 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
FAM3A-202ENST00000359889 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
FAM3A-202ENST00000359889 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
FAM3A-202ENST00000359889 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
FAM3A-202ENST00000359889 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
FAM3A-202ENST00000359889 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
FAM3A-202ENST00000359889 MT3P25713 68 aa5.77□□□□□ -1.49
FAM3A-202ENST00000359889 MT4P47944 62 aa5.77□□□□□ -1.49
FAM3A-202ENST00000359889 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
FAM3A-202ENST00000359889 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
FAM3A-202ENST00000359889 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
FAM3A-202ENST00000359889 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
FAM3A-202ENST00000359889 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
FAM3A-202ENST00000359889 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
FAM3A-202ENST00000359889 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
FAM3A-202ENST00000359889 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
FAM3A-202ENST00000359889 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
FAM3A-202ENST00000359889 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
FAM3A-202ENST00000359889 GPR98Q8WXG9 6306 aa5.23□□□□□ -1.57
FAM3A-202ENST00000359889 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
FAM3A-202ENST00000359889 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
FAM3A-202ENST00000359889 PRM1P04553 51 aa4.87□□□□□ -1.63
FAM3A-202ENST00000359889 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
FAM3A-202ENST00000359889 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
FAM3A-202ENST00000359889 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
FAM3A-202ENST00000359889 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
FAM3A-202ENST00000359889 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
FAM3A-202ENST00000359889 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
FAM3A-202ENST00000359889 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
FAM3A-202ENST00000359889 MUC5ACP98088 5654 aa4.58□□□□□ -1.68
FAM3A-202ENST00000359889 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
FAM3A-202ENST00000359889 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
FAM3A-202ENST00000359889 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
FAM3A-202ENST00000359889 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.73
FAM3A-202ENST00000359889 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
FAM3A-202ENST00000359889 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
FAM3A-202ENST00000359889 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
FAM3A-202ENST00000359889 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
FAM3A-202ENST00000359889 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
FAM3A-202ENST00000359889 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
FAM3A-202ENST00000359889 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
FAM3A-202ENST00000359889 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
FAM3A-202ENST00000359889 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
FAM3A-202ENST00000359889 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
FAM3A-202ENST00000359889 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 25.3 ms