RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 MT1LQ93083 61 aa5.45□□□□□ -1.54
CTPS2-201ENST00000359276 MT1GP13640 62 aa5.41□□□□□ -1.54
CTPS2-201ENST00000359276 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.55
CTPS2-201ENST00000359276 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
CTPS2-201ENST00000359276 MT1EP04732 61 aa5.36□□□□□ -1.55
CTPS2-201ENST00000359276 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
CTPS2-201ENST00000359276 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
CTPS2-201ENST00000359276 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
CTPS2-201ENST00000359276 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
CTPS2-201ENST00000359276 MT1MQ8N339 61 aa5.02□□□□□ -1.61
CTPS2-201ENST00000359276 SSPOA2VEC9 5147 aa5□□□□□ -1.61
CTPS2-201ENST00000359276 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
CTPS2-201ENST00000359276 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
CTPS2-201ENST00000359276 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
CTPS2-201ENST00000359276 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
CTPS2-201ENST00000359276 PRM1P04553 51 aa4.91□□□□□ -1.62
CTPS2-201ENST00000359276 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
CTPS2-201ENST00000359276 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.62
CTPS2-201ENST00000359276 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
CTPS2-201ENST00000359276 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
CTPS2-201ENST00000359276 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
CTPS2-201ENST00000359276 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
CTPS2-201ENST00000359276 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.65
CTPS2-201ENST00000359276 MT1AP04731 61 aa4.61□□□□□ -1.67
CTPS2-201ENST00000359276 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
CTPS2-201ENST00000359276 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
CTPS2-201ENST00000359276 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
CTPS2-201ENST00000359276 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
CTPS2-201ENST00000359276 MDN1Q9NU22 5596 aa4.47□□□□□ -1.69
CTPS2-201ENST00000359276 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
CTPS2-201ENST00000359276 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
CTPS2-201ENST00000359276 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
CTPS2-201ENST00000359276 SPRR2EP22531 72 aa4.26□□□□□ -1.73
CTPS2-201ENST00000359276 SPRR2BP35325 72 aa4.26□□□□□ -1.73
CTPS2-201ENST00000359276 SPRR2AP35326 72 aa4.26□□□□□ -1.73
CTPS2-201ENST00000359276 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
CTPS2-201ENST00000359276 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
CTPS2-201ENST00000359276 MT3P25713 68 aa4.17□□□□□ -1.74
CTPS2-201ENST00000359276 SPRR2DP22532 72 aa4.03□□□□□ -1.76
CTPS2-201ENST00000359276 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
CTPS2-201ENST00000359276 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
CTPS2-201ENST00000359276 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
CTPS2-201ENST00000359276 MT4P47944 62 aa3.78□□□□□ -1.8
CTPS2-201ENST00000359276 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
CTPS2-201ENST00000359276 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
CTPS2-201ENST00000359276 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
CTPS2-201ENST00000359276 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
CTPS2-201ENST00000359276 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
CTPS2-201ENST00000359276 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
CTPS2-201ENST00000359276 NEBP20929 6669 aa3.41□□□□□ -1.86
CTPS2-201ENST00000359276 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
CTPS2-201ENST00000359276 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
CTPS2-201ENST00000359276 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.88
CTPS2-201ENST00000359276 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
CTPS2-201ENST00000359276 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
CTPS2-201ENST00000359276 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
CTPS2-201ENST00000359276 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
CTPS2-201ENST00000359276 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
CTPS2-201ENST00000359276 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
CTPS2-201ENST00000359276 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
CTPS2-201ENST00000359276 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
CTPS2-201ENST00000359276 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
CTPS2-201ENST00000359276 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
CTPS2-201ENST00000359276 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CTPS2-201ENST00000359276 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
CTPS2-201ENST00000359276 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
CTPS2-201ENST00000359276 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
CTPS2-201ENST00000359276 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
CTPS2-201ENST00000359276 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
CTPS2-201ENST00000359276 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
CTPS2-201ENST00000359276 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CTPS2-201ENST00000359276 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CTPS2-201ENST00000359276 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
CTPS2-201ENST00000359276 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
CTPS2-201ENST00000359276 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
CTPS2-201ENST00000359276 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
CTPS2-201ENST00000359276 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms