RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
EDC4-201ENST00000358933 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.44
EDC4-201ENST00000358933 MT3P25713 68 aa6.07□□□□□ -1.44
EDC4-201ENST00000358933 EPPK1P58107 5090 aaKnown RBP6.07□□□□□ -1.44
EDC4-201ENST00000358933 ABCA13Q86UQ4 5058 aa6.06□□□□□ -1.44
EDC4-201ENST00000358933 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
EDC4-201ENST00000358933 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
EDC4-201ENST00000358933 HMCN2Q8NDA2 5059 aa5.93□□□□□ -1.46
EDC4-201ENST00000358933 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
EDC4-201ENST00000358933 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
EDC4-201ENST00000358933 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
EDC4-201ENST00000358933 MT1AP04731 61 aa5.86□□□□□ -1.47
EDC4-201ENST00000358933 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
EDC4-201ENST00000358933 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
EDC4-201ENST00000358933 OBSCNQ5VST9 7968 aa5.76□□□□□ -1.49
EDC4-201ENST00000358933 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
EDC4-201ENST00000358933 LCE1BQ5T7P3 118 aa5.6□□□□□ -1.51
EDC4-201ENST00000358933 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
EDC4-201ENST00000358933 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
EDC4-201ENST00000358933 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
EDC4-201ENST00000358933 MUC2Q02817 5179 aa5.55□□□□□ -1.52
EDC4-201ENST00000358933 MT4P47944 62 aa5.54□□□□□ -1.52
EDC4-201ENST00000358933 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
EDC4-201ENST00000358933 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
EDC4-201ENST00000358933 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
EDC4-201ENST00000358933 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
EDC4-201ENST00000358933 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
EDC4-201ENST00000358933 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
EDC4-201ENST00000358933 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
EDC4-201ENST00000358933 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
EDC4-201ENST00000358933 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
EDC4-201ENST00000358933 USH2AO75445 5202 aa5.18□□□□□ -1.58
EDC4-201ENST00000358933 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
EDC4-201ENST00000358933 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.6
EDC4-201ENST00000358933 KMT2DO14686 5537 aa4.91□□□□□ -1.62
EDC4-201ENST00000358933 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
EDC4-201ENST00000358933 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
EDC4-201ENST00000358933 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
EDC4-201ENST00000358933 MUC19Q7Z5P9 8384 aa4.74□□□□□ -1.65
EDC4-201ENST00000358933 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.66
EDC4-201ENST00000358933 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
EDC4-201ENST00000358933 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
EDC4-201ENST00000358933 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
EDC4-201ENST00000358933 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
EDC4-201ENST00000358933 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
EDC4-201ENST00000358933 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
EDC4-201ENST00000358933 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
EDC4-201ENST00000358933 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
EDC4-201ENST00000358933 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
EDC4-201ENST00000358933 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
EDC4-201ENST00000358933 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
EDC4-201ENST00000358933 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
EDC4-201ENST00000358933 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
EDC4-201ENST00000358933 NEBP20929 6669 aa4.02□□□□□ -1.77
EDC4-201ENST00000358933 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
EDC4-201ENST00000358933 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
EDC4-201ENST00000358933 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
EDC4-201ENST00000358933 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
EDC4-201ENST00000358933 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
EDC4-201ENST00000358933 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
EDC4-201ENST00000358933 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
EDC4-201ENST00000358933 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
EDC4-201ENST00000358933 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
EDC4-201ENST00000358933 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
EDC4-201ENST00000358933 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
EDC4-201ENST00000358933 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
EDC4-201ENST00000358933 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
EDC4-201ENST00000358933 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
EDC4-201ENST00000358933 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
EDC4-201ENST00000358933 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
EDC4-201ENST00000358933 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
EDC4-201ENST00000358933 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
EDC4-201ENST00000358933 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
EDC4-201ENST00000358933 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
EDC4-201ENST00000358933 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
EDC4-201ENST00000358933 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
EDC4-201ENST00000358933 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 266 ms