RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
TMEM170A-201ENST00000357613 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
TMEM170A-201ENST00000357613 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.76
TMEM170A-201ENST00000357613 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
TMEM170A-201ENST00000357613 USH2AO75445 5202 aa4.02□□□□□ -1.77
TMEM170A-201ENST00000357613 MT1LQ93083 61 aa4.02□□□□□ -1.77
TMEM170A-201ENST00000357613 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
TMEM170A-201ENST00000357613 MT1EP04732 61 aa4□□□□□ -1.77
TMEM170A-201ENST00000357613 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
TMEM170A-201ENST00000357613 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
TMEM170A-201ENST00000357613 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
TMEM170A-201ENST00000357613 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
TMEM170A-201ENST00000357613 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
TMEM170A-201ENST00000357613 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
TMEM170A-201ENST00000357613 MT1MQ8N339 61 aa3.87□□□□□ -1.79
TMEM170A-201ENST00000357613 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TMEM170A-201ENST00000357613 MT4P47944 62 aa3.86□□□□□ -1.79
TMEM170A-201ENST00000357613 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
TMEM170A-201ENST00000357613 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.8
TMEM170A-201ENST00000357613 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
TMEM170A-201ENST00000357613 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
TMEM170A-201ENST00000357613 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
TMEM170A-201ENST00000357613 KMT2DO14686 5537 aa3.72□□□□□ -1.81
TMEM170A-201ENST00000357613 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
TMEM170A-201ENST00000357613 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
TMEM170A-201ENST00000357613 MT3P25713 68 aa3.68□□□□□ -1.82
TMEM170A-201ENST00000357613 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
TMEM170A-201ENST00000357613 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
TMEM170A-201ENST00000357613 PRM1P04553 51 aa3.6□□□□□ -1.83
TMEM170A-201ENST00000357613 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
TMEM170A-201ENST00000357613 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
TMEM170A-201ENST00000357613 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
TMEM170A-201ENST00000357613 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
TMEM170A-201ENST00000357613 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
TMEM170A-201ENST00000357613 MT1AP04731 61 aa3.51□□□□□ -1.85
TMEM170A-201ENST00000357613 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
TMEM170A-201ENST00000357613 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
TMEM170A-201ENST00000357613 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
TMEM170A-201ENST00000357613 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.85
TMEM170A-201ENST00000357613 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
TMEM170A-201ENST00000357613 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
TMEM170A-201ENST00000357613 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
TMEM170A-201ENST00000357613 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
TMEM170A-201ENST00000357613 NEBP20929 6669 aa3.33□□□□□ -1.88
TMEM170A-201ENST00000357613 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
TMEM170A-201ENST00000357613 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
TMEM170A-201ENST00000357613 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
TMEM170A-201ENST00000357613 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
TMEM170A-201ENST00000357613 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
TMEM170A-201ENST00000357613 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
TMEM170A-201ENST00000357613 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
TMEM170A-201ENST00000357613 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
TMEM170A-201ENST00000357613 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
TMEM170A-201ENST00000357613 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
TMEM170A-201ENST00000357613 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
TMEM170A-201ENST00000357613 MUC5ACP98088 5654 aa2.78□□□□□ -1.97
TMEM170A-201ENST00000357613 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
TMEM170A-201ENST00000357613 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
TMEM170A-201ENST00000357613 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
TMEM170A-201ENST00000357613 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
TMEM170A-201ENST00000357613 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
TMEM170A-201ENST00000357613 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
TMEM170A-201ENST00000357613 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
TMEM170A-201ENST00000357613 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
TMEM170A-201ENST00000357613 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
TMEM170A-201ENST00000357613 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
TMEM170A-201ENST00000357613 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
TMEM170A-201ENST00000357613 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
TMEM170A-201ENST00000357613 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
TMEM170A-201ENST00000357613 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
TMEM170A-201ENST00000357613 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
TMEM170A-201ENST00000357613 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
TMEM170A-201ENST00000357613 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
TMEM170A-201ENST00000357613 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
TMEM170A-201ENST00000357613 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
TMEM170A-201ENST00000357613 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
TMEM170A-201ENST00000357613 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms