RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 LINC01558Q9Y6Z2 57 aa1.73□□□□□ -2.13
SMC1B-201ENST00000357450 MT1FP04733 61 aa1.73□□□□□ -2.13
SMC1B-201ENST00000357450 LUZP6Q538Z0 58 aa1.73□□□□□ -2.13
SMC1B-201ENST00000357450 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
SMC1B-201ENST00000357450 KRTAP10-5P60370 271 aa1.71□□□□□ -2.14
SMC1B-201ENST00000357450 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
SMC1B-201ENST00000357450 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
SMC1B-201ENST00000357450 DMAC1Q96GE9 116 aa1.71□□□□□ -2.14
SMC1B-201ENST00000357450 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
SMC1B-201ENST00000357450 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
SMC1B-201ENST00000357450 SPRR2EP22531 72 aa1.68□□□□□ -2.14
SMC1B-201ENST00000357450 SPRR2BP35325 72 aa1.68□□□□□ -2.14
SMC1B-201ENST00000357450 SPRR2AP35326 72 aa1.68□□□□□ -2.14
SMC1B-201ENST00000357450 MACF1Q9UPN3 7388 aaKnown RBP1.67□□□□□ -2.14
SMC1B-201ENST00000357450 TNP1P09430 55 aa1.66□□□□□ -2.14
SMC1B-201ENST00000357450 SPRR5A0A1B0GTR4 108 aa1.64□□□□□ -2.15
SMC1B-201ENST00000357450 KRTAP25-1Q3LHN0 102 aa1.64□□□□□ -2.15
SMC1B-201ENST00000357450 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
SMC1B-201ENST00000357450 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
SMC1B-201ENST00000357450 SPRR2DP22532 72 aa1.62□□□□□ -2.15
SMC1B-201ENST00000357450 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
SMC1B-201ENST00000357450 KRTAP10-12P60413 245 aa1.59□□□□□ -2.16
SMC1B-201ENST00000357450 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.16
SMC1B-201ENST00000357450 KRTAP12-2P59991 146 aa1.58□□□□□ -2.16
SMC1B-201ENST00000357450 PP632Q6XCG6 107 aa1.58□□□□□ -2.16
SMC1B-201ENST00000357450 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
SMC1B-201ENST00000357450 SYNE1Q8NF91 8797 aaKnown RBP1.56□□□□□ -2.16
SMC1B-201ENST00000357450 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
SMC1B-201ENST00000357450 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
SMC1B-201ENST00000357450 KRTAP19-6Q3LI70 58 aa1.55□□□□□ -2.16
SMC1B-201ENST00000357450 NEBP20929 6669 aa1.54□□□□□ -2.16
SMC1B-201ENST00000357450 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
SMC1B-201ENST00000357450 KRTAP4-3Q9BYR4 195 aa1.53□□□□□ -2.16
SMC1B-201ENST00000357450 MDN1Q9NU22 5596 aa1.53□□□□□ -2.17
SMC1B-201ENST00000357450 SPRR2GQ9BYE4 73 aa1.52□□□□□ -2.17
SMC1B-201ENST00000357450 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
SMC1B-201ENST00000357450 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
SMC1B-201ENST00000357450 MT1BP07438 61 aa1.5□□□□□ -2.17
SMC1B-201ENST00000357450 MT4P47944 62 aa1.49□□□□□ -2.17
SMC1B-201ENST00000357450 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
SMC1B-201ENST00000357450 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.17
SMC1B-201ENST00000357450 MT1XP80297 61 aa1.46□□□□□ -2.18
SMC1B-201ENST00000357450 KRTAP2-1Q9BYU5 128 aa1.46□□□□□ -2.18
SMC1B-201ENST00000357450 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
SMC1B-201ENST00000357450 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
SMC1B-201ENST00000357450 LCE3AQ5TA76 89 aa1.42□□□□□ -2.18
SMC1B-201ENST00000357450 KRTAP19-5Q3LI72 72 aa1.41□□□□□ -2.18
SMC1B-201ENST00000357450 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
SMC1B-201ENST00000357450 KRTAP19-7Q3SYF9 63 aa1.39□□□□□ -2.19
SMC1B-201ENST00000357450 LCE3CQ5T5A8 94 aa1.36□□□□□ -2.19
SMC1B-201ENST00000357450 INE1O15225 51 aa1.36□□□□□ -2.19
SMC1B-201ENST00000357450 MT1GP13640 62 aa1.35□□□□□ -2.19
SMC1B-201ENST00000357450 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
SMC1B-201ENST00000357450 KRTAP5-8O75690 187 aa1.32□□□□□ -2.2
SMC1B-201ENST00000357450 LCE3EQ5T5B0 92 aa1.32□□□□□ -2.2
SMC1B-201ENST00000357450 MT1EP04732 61 aa1.29□□□□□ -2.2
SMC1B-201ENST00000357450 MT1MQ8N339 61 aa1.27□□□□□ -2.21
SMC1B-201ENST00000357450 LCE1CQ5T751 118 aa1.26□□□□□ -2.21
SMC1B-201ENST00000357450 LCE1BQ5T7P3 118 aa1.26□□□□□ -2.21
SMC1B-201ENST00000357450 MT1LQ93083 61 aa1.25□□□□□ -2.21
SMC1B-201ENST00000357450 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
SMC1B-201ENST00000357450 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
SMC1B-201ENST00000357450 MT3P25713 68 aa1.14□□□□□ -2.23
SMC1B-201ENST00000357450 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
SMC1B-201ENST00000357450 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
SMC1B-201ENST00000357450 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
SMC1B-201ENST00000357450 MT1AP04731 61 aa1.08□□□□□ -2.24
SMC1B-201ENST00000357450 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
SMC1B-201ENST00000357450 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
SMC1B-201ENST00000357450 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
SMC1B-201ENST00000357450 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
SMC1B-201ENST00000357450 LCE3DQ9BYE3 92 aa1.04□□□□□ -2.24
SMC1B-201ENST00000357450 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
SMC1B-201ENST00000357450 PRM1P04553 51 aa0.9□□□□□ -2.27
SMC1B-201ENST00000357450 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
SMC1B-201ENST00000357450 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
SMC1B-201ENST00000357450 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms