RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 MT1EP04732 61 aa4.92□□□□□ -1.62
TOP3B-201ENST00000357179 USH2AO75445 5202 aa4.92□□□□□ -1.62
TOP3B-201ENST00000357179 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
TOP3B-201ENST00000357179 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
TOP3B-201ENST00000357179 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
TOP3B-201ENST00000357179 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
TOP3B-201ENST00000357179 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
TOP3B-201ENST00000357179 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
TOP3B-201ENST00000357179 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
TOP3B-201ENST00000357179 MT1GP13640 62 aa4.58□□□□□ -1.68
TOP3B-201ENST00000357179 MT1MQ8N339 61 aa4.58□□□□□ -1.68
TOP3B-201ENST00000357179 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
TOP3B-201ENST00000357179 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
TOP3B-201ENST00000357179 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
TOP3B-201ENST00000357179 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
TOP3B-201ENST00000357179 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
TOP3B-201ENST00000357179 MT1AP04731 61 aa4.33□□□□□ -1.72
TOP3B-201ENST00000357179 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
TOP3B-201ENST00000357179 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
TOP3B-201ENST00000357179 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
TOP3B-201ENST00000357179 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
TOP3B-201ENST00000357179 PRM1P04553 51 aa4.28□□□□□ -1.72
TOP3B-201ENST00000357179 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
TOP3B-201ENST00000357179 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
TOP3B-201ENST00000357179 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
TOP3B-201ENST00000357179 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
TOP3B-201ENST00000357179 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
TOP3B-201ENST00000357179 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
TOP3B-201ENST00000357179 NEBP20929 6669 aa4.16□□□□□ -1.74
TOP3B-201ENST00000357179 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
TOP3B-201ENST00000357179 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
TOP3B-201ENST00000357179 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
TOP3B-201ENST00000357179 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
TOP3B-201ENST00000357179 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
TOP3B-201ENST00000357179 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
TOP3B-201ENST00000357179 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
TOP3B-201ENST00000357179 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.78
TOP3B-201ENST00000357179 SPRR2EP22531 72 aa3.88□□□□□ -1.79
TOP3B-201ENST00000357179 SPRR2BP35325 72 aa3.88□□□□□ -1.79
TOP3B-201ENST00000357179 SPRR2AP35326 72 aa3.88□□□□□ -1.79
TOP3B-201ENST00000357179 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
TOP3B-201ENST00000357179 SPRR2DP22532 72 aa3.75□□□□□ -1.81
TOP3B-201ENST00000357179 MT3P25713 68 aa3.74□□□□□ -1.81
TOP3B-201ENST00000357179 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
TOP3B-201ENST00000357179 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
TOP3B-201ENST00000357179 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
TOP3B-201ENST00000357179 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
TOP3B-201ENST00000357179 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
TOP3B-201ENST00000357179 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
TOP3B-201ENST00000357179 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
TOP3B-201ENST00000357179 MT4P47944 62 aa3.29□□□□□ -1.88
TOP3B-201ENST00000357179 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
TOP3B-201ENST00000357179 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
TOP3B-201ENST00000357179 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
TOP3B-201ENST00000357179 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
TOP3B-201ENST00000357179 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TOP3B-201ENST00000357179 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
TOP3B-201ENST00000357179 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
TOP3B-201ENST00000357179 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
TOP3B-201ENST00000357179 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
TOP3B-201ENST00000357179 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
TOP3B-201ENST00000357179 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
TOP3B-201ENST00000357179 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
TOP3B-201ENST00000357179 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
TOP3B-201ENST00000357179 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
TOP3B-201ENST00000357179 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
TOP3B-201ENST00000357179 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
TOP3B-201ENST00000357179 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
TOP3B-201ENST00000357179 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
TOP3B-201ENST00000357179 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
TOP3B-201ENST00000357179 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
TOP3B-201ENST00000357179 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
TOP3B-201ENST00000357179 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
TOP3B-201ENST00000357179 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TOP3B-201ENST00000357179 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
TOP3B-201ENST00000357179 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
TOP3B-201ENST00000357179 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 80.9 ms