RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 MT1LQ93083 61 aa6.13□□□□□ -1.43
GYPC-202ENST00000356887 MT1EP04732 61 aa6.12□□□□□ -1.43
GYPC-202ENST00000356887 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
GYPC-202ENST00000356887 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
GYPC-202ENST00000356887 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
GYPC-202ENST00000356887 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
GYPC-202ENST00000356887 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
GYPC-202ENST00000356887 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
GYPC-202ENST00000356887 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
GYPC-202ENST00000356887 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
GYPC-202ENST00000356887 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
GYPC-202ENST00000356887 KRTAP5-9P26371 169 aa5.72□□□□□ -1.49
GYPC-202ENST00000356887 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.49
GYPC-202ENST00000356887 MT1MQ8N339 61 aa5.71□□□□□ -1.49
GYPC-202ENST00000356887 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
GYPC-202ENST00000356887 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
GYPC-202ENST00000356887 MT1GP13640 62 aa5.7□□□□□ -1.5
GYPC-202ENST00000356887 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
GYPC-202ENST00000356887 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
GYPC-202ENST00000356887 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
GYPC-202ENST00000356887 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
GYPC-202ENST00000356887 SPRR2EP22531 72 aa5.46□□□□□ -1.53
GYPC-202ENST00000356887 SPRR2BP35325 72 aa5.46□□□□□ -1.53
GYPC-202ENST00000356887 SPRR2AP35326 72 aa5.46□□□□□ -1.53
GYPC-202ENST00000356887 NEBP20929 6669 aa5.42□□□□□ -1.54
GYPC-202ENST00000356887 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
GYPC-202ENST00000356887 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
GYPC-202ENST00000356887 SPRR2DP22532 72 aa5.25□□□□□ -1.57
GYPC-202ENST00000356887 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
GYPC-202ENST00000356887 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
GYPC-202ENST00000356887 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
GYPC-202ENST00000356887 MT1AP04731 61 aa5.17□□□□□ -1.58
GYPC-202ENST00000356887 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
GYPC-202ENST00000356887 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
GYPC-202ENST00000356887 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
GYPC-202ENST00000356887 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
GYPC-202ENST00000356887 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
GYPC-202ENST00000356887 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
GYPC-202ENST00000356887 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
GYPC-202ENST00000356887 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
GYPC-202ENST00000356887 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
GYPC-202ENST00000356887 PRM1P04553 51 aa4.75□□□□□ -1.65
GYPC-202ENST00000356887 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
GYPC-202ENST00000356887 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
GYPC-202ENST00000356887 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
GYPC-202ENST00000356887 MT3P25713 68 aa4.62□□□□□ -1.67
GYPC-202ENST00000356887 MT4P47944 62 aa4.59□□□□□ -1.67
GYPC-202ENST00000356887 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
GYPC-202ENST00000356887 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
GYPC-202ENST00000356887 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
GYPC-202ENST00000356887 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
GYPC-202ENST00000356887 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
GYPC-202ENST00000356887 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
GYPC-202ENST00000356887 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
GYPC-202ENST00000356887 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
GYPC-202ENST00000356887 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
GYPC-202ENST00000356887 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
GYPC-202ENST00000356887 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
GYPC-202ENST00000356887 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
GYPC-202ENST00000356887 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
GYPC-202ENST00000356887 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
GYPC-202ENST00000356887 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
GYPC-202ENST00000356887 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
GYPC-202ENST00000356887 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
GYPC-202ENST00000356887 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
GYPC-202ENST00000356887 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
GYPC-202ENST00000356887 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
GYPC-202ENST00000356887 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
GYPC-202ENST00000356887 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
GYPC-202ENST00000356887 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
GYPC-202ENST00000356887 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
GYPC-202ENST00000356887 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
GYPC-202ENST00000356887 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
GYPC-202ENST00000356887 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
GYPC-202ENST00000356887 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
GYPC-202ENST00000356887 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
GYPC-202ENST00000356887 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms