RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 EPPK1P58107 5090 aaKnown RBP3.42□□□□□ -1.86
GTF3C1-201ENST00000356183 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
GTF3C1-201ENST00000356183 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
GTF3C1-201ENST00000356183 MT1EP04732 61 aa3.37□□□□□ -1.87
GTF3C1-201ENST00000356183 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
GTF3C1-201ENST00000356183 MT3P25713 68 aa3.34□□□□□ -1.88
GTF3C1-201ENST00000356183 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
GTF3C1-201ENST00000356183 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
GTF3C1-201ENST00000356183 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
GTF3C1-201ENST00000356183 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
GTF3C1-201ENST00000356183 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
GTF3C1-201ENST00000356183 MT1MQ8N339 61 aa3.28□□□□□ -1.88
GTF3C1-201ENST00000356183 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.89
GTF3C1-201ENST00000356183 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
GTF3C1-201ENST00000356183 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
GTF3C1-201ENST00000356183 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
GTF3C1-201ENST00000356183 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
GTF3C1-201ENST00000356183 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
GTF3C1-201ENST00000356183 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
GTF3C1-201ENST00000356183 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
GTF3C1-201ENST00000356183 FSIP2Q5CZC0 6907 aa3.15□□□□□ -1.9
GTF3C1-201ENST00000356183 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
GTF3C1-201ENST00000356183 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
GTF3C1-201ENST00000356183 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
GTF3C1-201ENST00000356183 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
GTF3C1-201ENST00000356183 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
GTF3C1-201ENST00000356183 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
GTF3C1-201ENST00000356183 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
GTF3C1-201ENST00000356183 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
GTF3C1-201ENST00000356183 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
GTF3C1-201ENST00000356183 MT1AP04731 61 aa3.05□□□□□ -1.92
GTF3C1-201ENST00000356183 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
GTF3C1-201ENST00000356183 MUC2Q02817 5179 aa3□□□□□ -1.93
GTF3C1-201ENST00000356183 USH2AO75445 5202 aa2.95□□□□□ -1.94
GTF3C1-201ENST00000356183 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
GTF3C1-201ENST00000356183 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.95
GTF3C1-201ENST00000356183 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
GTF3C1-201ENST00000356183 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
GTF3C1-201ENST00000356183 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
GTF3C1-201ENST00000356183 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
GTF3C1-201ENST00000356183 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
GTF3C1-201ENST00000356183 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
GTF3C1-201ENST00000356183 KMT2DO14686 5537 aa2.68□□□□□ -1.98
GTF3C1-201ENST00000356183 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
GTF3C1-201ENST00000356183 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.98
GTF3C1-201ENST00000356183 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.99
GTF3C1-201ENST00000356183 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
GTF3C1-201ENST00000356183 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
GTF3C1-201ENST00000356183 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
GTF3C1-201ENST00000356183 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
GTF3C1-201ENST00000356183 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
GTF3C1-201ENST00000356183 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
GTF3C1-201ENST00000356183 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
GTF3C1-201ENST00000356183 KRTAP5-9P26371 169 aa2.4□□□□□ -2.02
GTF3C1-201ENST00000356183 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
GTF3C1-201ENST00000356183 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
GTF3C1-201ENST00000356183 NEBP20929 6669 aa2.3□□□□□ -2.04
GTF3C1-201ENST00000356183 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
GTF3C1-201ENST00000356183 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
GTF3C1-201ENST00000356183 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
GTF3C1-201ENST00000356183 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
GTF3C1-201ENST00000356183 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
GTF3C1-201ENST00000356183 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
GTF3C1-201ENST00000356183 KRTAP5-3Q6L8H2 238 aa1.88□□□□□ -2.11
GTF3C1-201ENST00000356183 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
GTF3C1-201ENST00000356183 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
GTF3C1-201ENST00000356183 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
GTF3C1-201ENST00000356183 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
GTF3C1-201ENST00000356183 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
GTF3C1-201ENST00000356183 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
GTF3C1-201ENST00000356183 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
GTF3C1-201ENST00000356183 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
GTF3C1-201ENST00000356183 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
GTF3C1-201ENST00000356183 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
GTF3C1-201ENST00000356183 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
GTF3C1-201ENST00000356183 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
GTF3C1-201ENST00000356183 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms