RNA–Protein interactions for RNA: ENST00000356093.6

EPB41-204, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5 BASIC

Gene EPB41, Length 5,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-204ENST00000356093 PRM1P04553 51 aa2.96□□□□□ -1.94
EPB41-204ENST00000356093 MT1MQ8N339 61 aa2.96□□□□□ -1.94
EPB41-204ENST00000356093 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
EPB41-204ENST00000356093 LCE2DQ5TA82 110 aaPredicted RBP2.92□□□□□ -1.94
EPB41-204ENST00000356093 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
EPB41-204ENST00000356093 UBR4Q5T4S7 5183 aa2.87□□□□□ -1.95
EPB41-204ENST00000356093 LCE2AQ5TA79 106 aaPredicted RBP2.85□□□□□ -1.95
EPB41-204ENST00000356093 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
EPB41-204ENST00000356093 MT1AP04731 61 aa2.81□□□□□ -1.96
EPB41-204ENST00000356093 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
EPB41-204ENST00000356093 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
EPB41-204ENST00000356093 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
EPB41-204ENST00000356093 KRTAP9-2Q9BYQ4 174 aa2.8□□□□□ -1.96
EPB41-204ENST00000356093 LOC100996750A0A140TA64 210 aa2.79□□□□□ -1.96
EPB41-204ENST00000356093 KRTAP9-6A0A140TA67 174 aa2.78□□□□□ -1.96
EPB41-204ENST00000356093 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
EPB41-204ENST00000356093 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
EPB41-204ENST00000356093 MT4P47944 62 aa2.7□□□□□ -1.98
EPB41-204ENST00000356093 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
EPB41-204ENST00000356093 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
EPB41-204ENST00000356093 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
EPB41-204ENST00000356093 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
EPB41-204ENST00000356093 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
EPB41-204ENST00000356093 USH2AO75445 5202 aa2.58□□□□□ -2
EPB41-204ENST00000356093 LCE4AQ5TA78 99 aa2.57□□□□□ -2
EPB41-204ENST00000356093 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
EPB41-204ENST00000356093 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
EPB41-204ENST00000356093 KRTAP9-7A8MTY7 169 aa2.55□□□□□ -2
EPB41-204ENST00000356093 KMT2DO14686 5537 aa2.55□□□□□ -2
EPB41-204ENST00000356093 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
EPB41-204ENST00000356093 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
EPB41-204ENST00000356093 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
EPB41-204ENST00000356093 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
EPB41-204ENST00000356093 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
EPB41-204ENST00000356093 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.42□□□□□ -2.02
EPB41-204ENST00000356093 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
EPB41-204ENST00000356093 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
EPB41-204ENST00000356093 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
EPB41-204ENST00000356093 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
EPB41-204ENST00000356093 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
EPB41-204ENST00000356093 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
EPB41-204ENST00000356093 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
EPB41-204ENST00000356093 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.05
EPB41-204ENST00000356093 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
EPB41-204ENST00000356093 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
EPB41-204ENST00000356093 KRTAP4-11Q9BYQ6 195 aa2.13□□□□□ -2.07
EPB41-204ENST00000356093 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
EPB41-204ENST00000356093 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
EPB41-204ENST00000356093 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
EPB41-204ENST00000356093 MACF1Q9UPN3 7388 aaKnown RBP2.07□□□□□ -2.08
EPB41-204ENST00000356093 NEBP20929 6669 aa2.06□□□□□ -2.08
EPB41-204ENST00000356093 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
EPB41-204ENST00000356093 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
EPB41-204ENST00000356093 KRTAP4-6Q9BYQ5 205 aa2.03□□□□□ -2.08
EPB41-204ENST00000356093 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
EPB41-204ENST00000356093 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
EPB41-204ENST00000356093 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
EPB41-204ENST00000356093 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
EPB41-204ENST00000356093 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
EPB41-204ENST00000356093 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
EPB41-204ENST00000356093 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
EPB41-204ENST00000356093 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
EPB41-204ENST00000356093 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
EPB41-204ENST00000356093 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
EPB41-204ENST00000356093 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
EPB41-204ENST00000356093 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
EPB41-204ENST00000356093 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
EPB41-204ENST00000356093 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
EPB41-204ENST00000356093 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
EPB41-204ENST00000356093 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
EPB41-204ENST00000356093 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
EPB41-204ENST00000356093 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
EPB41-204ENST00000356093 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
EPB41-204ENST00000356093 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
EPB41-204ENST00000356093 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
EPB41-204ENST00000356093 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
EPB41-204ENST00000356093 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms