RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 LOC100996750A0A140TA64 210 aa2.56□□□□□ -2
VANGL1-202ENST00000355485 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
VANGL1-202ENST00000355485 KRTAP9-8Q9BYQ0 159 aa2.55□□□□□ -2
VANGL1-202ENST00000355485 LCE1DQ5T752 114 aa2.54□□□□□ -2
VANGL1-202ENST00000355485 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
VANGL1-202ENST00000355485 LCE2AQ5TA79 106 aaPredicted RBP2.51□□□□□ -2.01
VANGL1-202ENST00000355485 KRTAP9-3Q9BYQ3 159 aa2.5□□□□□ -2.01
VANGL1-202ENST00000355485 LCE5AQ5TCM9 118 aa2.5□□□□□ -2.01
VANGL1-202ENST00000355485 MT1LQ93083 61 aa2.49□□□□□ -2.01
VANGL1-202ENST00000355485 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
VANGL1-202ENST00000355485 KRTAP19-3Q7Z4W3 81 aa2.47□□□□□ -2.01
VANGL1-202ENST00000355485 KRTAP4-9Q9BYQ8 210 aa2.46□□□□□ -2.01
VANGL1-202ENST00000355485 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
VANGL1-202ENST00000355485 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
VANGL1-202ENST00000355485 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
VANGL1-202ENST00000355485 LCE1AQ5T7P2 110 aa2.45□□□□□ -2.02
VANGL1-202ENST00000355485 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
VANGL1-202ENST00000355485 KRTAP9-2Q9BYQ4 174 aa2.42□□□□□ -2.02
VANGL1-202ENST00000355485 KRTAP9-6A0A140TA67 174 aa2.42□□□□□ -2.02
VANGL1-202ENST00000355485 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
VANGL1-202ENST00000355485 MT1EP04732 61 aa2.41□□□□□ -2.02
VANGL1-202ENST00000355485 USH2AO75445 5202 aa2.41□□□□□ -2.02
VANGL1-202ENST00000355485 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
VANGL1-202ENST00000355485 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
VANGL1-202ENST00000355485 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
VANGL1-202ENST00000355485 KRTAP19-6Q3LI70 58 aa2.33□□□□□ -2.04
VANGL1-202ENST00000355485 MT1MQ8N339 61 aa2.31□□□□□ -2.04
VANGL1-202ENST00000355485 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
VANGL1-202ENST00000355485 KRTAP9-7A8MTY7 169 aa2.28□□□□□ -2.05
VANGL1-202ENST00000355485 KRTAP9-6A8MVA2 160 aa2.27□□□□□ -2.05
VANGL1-202ENST00000355485 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
VANGL1-202ENST00000355485 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
VANGL1-202ENST00000355485 MT1AP04731 61 aa2.23□□□□□ -2.05
VANGL1-202ENST00000355485 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
VANGL1-202ENST00000355485 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
VANGL1-202ENST00000355485 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
VANGL1-202ENST00000355485 SYNE2Q8WXH0 6885 aaKnown RBP2.19□□□□□ -2.06
VANGL1-202ENST00000355485 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
VANGL1-202ENST00000355485 KMT2DO14686 5537 aa2.16□□□□□ -2.06
VANGL1-202ENST00000355485 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
VANGL1-202ENST00000355485 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
VANGL1-202ENST00000355485 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.14□□□□□ -2.07
VANGL1-202ENST00000355485 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
VANGL1-202ENST00000355485 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
VANGL1-202ENST00000355485 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
VANGL1-202ENST00000355485 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
VANGL1-202ENST00000355485 KRTAP9-4Q9BYQ2 154 aa2.02□□□□□ -2.09
VANGL1-202ENST00000355485 NEBP20929 6669 aa2.02□□□□□ -2.09
VANGL1-202ENST00000355485 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
VANGL1-202ENST00000355485 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
VANGL1-202ENST00000355485 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
VANGL1-202ENST00000355485 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
VANGL1-202ENST00000355485 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
VANGL1-202ENST00000355485 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
VANGL1-202ENST00000355485 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
VANGL1-202ENST00000355485 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
VANGL1-202ENST00000355485 KRTAP4-6Q9BYQ5 205 aa1.64□□□□□ -2.15
VANGL1-202ENST00000355485 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
VANGL1-202ENST00000355485 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
VANGL1-202ENST00000355485 KRTAP4-12Q9BQ66 201 aa1.59□□□□□ -2.16
VANGL1-202ENST00000355485 KRTAP4-2Q9BYR5 136 aa1.59□□□□□ -2.16
VANGL1-202ENST00000355485 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
VANGL1-202ENST00000355485 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
VANGL1-202ENST00000355485 KRTAP5-3Q6L8H2 238 aa1.47□□□□□ -2.17
VANGL1-202ENST00000355485 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
VANGL1-202ENST00000355485 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
VANGL1-202ENST00000355485 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.2
VANGL1-202ENST00000355485 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
VANGL1-202ENST00000355485 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
VANGL1-202ENST00000355485 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
VANGL1-202ENST00000355485 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
VANGL1-202ENST00000355485 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
VANGL1-202ENST00000355485 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
VANGL1-202ENST00000355485 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
VANGL1-202ENST00000355485 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
VANGL1-202ENST00000355485 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
VANGL1-202ENST00000355485 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 114.8 ms