RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 NDUFAF8A1L188 74 aa7.88□□□□□ -1.15
SCAMP3-202ENST00000355379 MT1GP13640 62 aa7.88□□□□□ -1.15
SCAMP3-202ENST00000355379 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
SCAMP3-202ENST00000355379 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
SCAMP3-202ENST00000355379 MT1MQ8N339 61 aa7.78□□□□□ -1.16
SCAMP3-202ENST00000355379 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
SCAMP3-202ENST00000355379 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
SCAMP3-202ENST00000355379 KRTAP6-3Q3LI67 103 aa7.72□□□□□ -1.17
SCAMP3-202ENST00000355379 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
SCAMP3-202ENST00000355379 LCE1AQ5T7P2 110 aa7.65□□□□□ -1.18
SCAMP3-202ENST00000355379 KRTAP9-6A8MVA2 160 aa7.63□□□□□ -1.19
SCAMP3-202ENST00000355379 KRTAP4-3Q9BYR4 195 aa7.58□□□□□ -1.2
SCAMP3-202ENST00000355379 SPRR2EP22531 72 aa7.55□□□□□ -1.2
SCAMP3-202ENST00000355379 SPRR2BP35325 72 aa7.55□□□□□ -1.2
SCAMP3-202ENST00000355379 SPRR2AP35326 72 aa7.55□□□□□ -1.2
SCAMP3-202ENST00000355379 MDN1Q9NU22 5596 aa7.39□□□□□ -1.23
SCAMP3-202ENST00000355379 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
SCAMP3-202ENST00000355379 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
SCAMP3-202ENST00000355379 SPRR2DP22532 72 aa7.27□□□□□ -1.25
SCAMP3-202ENST00000355379 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.27
SCAMP3-202ENST00000355379 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.27
SCAMP3-202ENST00000355379 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.27
SCAMP3-202ENST00000355379 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
SCAMP3-202ENST00000355379 H3BS24 57 aa7.09□□□□□ -1.27
SCAMP3-202ENST00000355379 NEBP20929 6669 aa7.03□□□□□ -1.28
SCAMP3-202ENST00000355379 KRTAP5-5Q701N2 237 aaPredicted RBP7.01□□□□□ -1.29
SCAMP3-202ENST00000355379 A0A0A0MQY5 61 aa6.98□□□□□ -1.29
SCAMP3-202ENST00000355379 LCE3BQ5TA77 95 aa6.98□□□□□ -1.29
SCAMP3-202ENST00000355379 MT1AP04731 61 aa6.91□□□□□ -1.3
SCAMP3-202ENST00000355379 KRTAP6-1Q3LI64 71 aa6.82□□□□□ -1.32
SCAMP3-202ENST00000355379 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.35
SCAMP3-202ENST00000355379 KRTAP2-2Q9BYT5 123 aa6.58□□□□□ -1.36
SCAMP3-202ENST00000355379 INE1O15225 51 aa6.57□□□□□ -1.36
SCAMP3-202ENST00000355379 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
SCAMP3-202ENST00000355379 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
SCAMP3-202ENST00000355379 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
SCAMP3-202ENST00000355379 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
SCAMP3-202ENST00000355379 KRTAP12-4P60329 112 aa6.46□□□□□ -1.37
SCAMP3-202ENST00000355379 MT4P47944 62 aa6.28□□□□□ -1.4
SCAMP3-202ENST00000355379 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
SCAMP3-202ENST00000355379 MT3P25713 68 aa6.25□□□□□ -1.41
SCAMP3-202ENST00000355379 KRTAP6-2Q3LI66 62 aa6.25□□□□□ -1.41
SCAMP3-202ENST00000355379 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
SCAMP3-202ENST00000355379 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
SCAMP3-202ENST00000355379 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
SCAMP3-202ENST00000355379 LCE3DQ9BYE3 92 aa6.09□□□□□ -1.44
SCAMP3-202ENST00000355379 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
SCAMP3-202ENST00000355379 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
SCAMP3-202ENST00000355379 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
SCAMP3-202ENST00000355379 LCE3EQ5T5B0 92 aa5.95□□□□□ -1.46
SCAMP3-202ENST00000355379 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
SCAMP3-202ENST00000355379 LCE1EQ5T753 118 aa5.43□□□□□ -1.54
SCAMP3-202ENST00000355379 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
SCAMP3-202ENST00000355379 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
SCAMP3-202ENST00000355379 PRM1P04553 51 aa5.22□□□□□ -1.57
SCAMP3-202ENST00000355379 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
SCAMP3-202ENST00000355379 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
SCAMP3-202ENST00000355379 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
SCAMP3-202ENST00000355379 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
SCAMP3-202ENST00000355379 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
SCAMP3-202ENST00000355379 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
SCAMP3-202ENST00000355379 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
SCAMP3-202ENST00000355379 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
SCAMP3-202ENST00000355379 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SCAMP3-202ENST00000355379 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
SCAMP3-202ENST00000355379 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
SCAMP3-202ENST00000355379 KRTAP21-2Q3LI59 83 aa4.48□□□□□ -1.69
SCAMP3-202ENST00000355379 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
SCAMP3-202ENST00000355379 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
SCAMP3-202ENST00000355379 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
SCAMP3-202ENST00000355379 LCE1FQ5T754 118 aa4□□□□□ -1.77
SCAMP3-202ENST00000355379 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
SCAMP3-202ENST00000355379 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
SCAMP3-202ENST00000355379 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
SCAMP3-202ENST00000355379 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
SCAMP3-202ENST00000355379 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
SCAMP3-202ENST00000355379 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 79.4 ms