RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
HMBOX1-202ENST00000355231 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
HMBOX1-202ENST00000355231 MT1HP80294 61 aa2.21□□□□□ -2.06
HMBOX1-202ENST00000355231 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
HMBOX1-202ENST00000355231 TNP1P09430 55 aa2.16□□□□□ -2.06
HMBOX1-202ENST00000355231 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.06
HMBOX1-202ENST00000355231 USH2AO75445 5202 aa2.12□□□□□ -2.07
HMBOX1-202ENST00000355231 M0R2T5 61 aa2.09□□□□□ -2.07
HMBOX1-202ENST00000355231 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.08
HMBOX1-202ENST00000355231 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
HMBOX1-202ENST00000355231 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
HMBOX1-202ENST00000355231 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
HMBOX1-202ENST00000355231 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
HMBOX1-202ENST00000355231 MT2AP02795 61 aa2.05□□□□□ -2.08
HMBOX1-202ENST00000355231 MT1FP04733 61 aa2.04□□□□□ -2.08
HMBOX1-202ENST00000355231 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
HMBOX1-202ENST00000355231 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
HMBOX1-202ENST00000355231 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
HMBOX1-202ENST00000355231 KMT2DO14686 5537 aa1.96□□□□□ -2.1
HMBOX1-202ENST00000355231 KRTAP19-6Q3LI70 58 aa1.95□□□□□ -2.1
HMBOX1-202ENST00000355231 SPRR2GQ9BYE4 73 aa1.95□□□□□ -2.1
HMBOX1-202ENST00000355231 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
HMBOX1-202ENST00000355231 MUC12Q9UKN1 5478 aa1.93□□□□□ -2.1
HMBOX1-202ENST00000355231 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
HMBOX1-202ENST00000355231 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
HMBOX1-202ENST00000355231 MT3P25713 68 aa1.91□□□□□ -2.1
HMBOX1-202ENST00000355231 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
HMBOX1-202ENST00000355231 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
HMBOX1-202ENST00000355231 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
HMBOX1-202ENST00000355231 MT1BP07438 61 aa1.86□□□□□ -2.11
HMBOX1-202ENST00000355231 KRTAP10-12P60413 245 aa1.84□□□□□ -2.11
HMBOX1-202ENST00000355231 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
HMBOX1-202ENST00000355231 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
HMBOX1-202ENST00000355231 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
HMBOX1-202ENST00000355231 LCE3AQ5TA76 89 aa1.83□□□□□ -2.12
HMBOX1-202ENST00000355231 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
HMBOX1-202ENST00000355231 MT1XP80297 61 aa1.81□□□□□ -2.12
HMBOX1-202ENST00000355231 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
HMBOX1-202ENST00000355231 LCE3CQ5T5A8 94 aa1.8□□□□□ -2.12
HMBOX1-202ENST00000355231 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
HMBOX1-202ENST00000355231 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
HMBOX1-202ENST00000355231 OBSCNQ5VST9 7968 aa1.76□□□□□ -2.13
HMBOX1-202ENST00000355231 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
HMBOX1-202ENST00000355231 KRTAP9-6A8MVA2 160 aa1.73□□□□□ -2.13
HMBOX1-202ENST00000355231 SPRR2FQ96RM1 72 aa1.7□□□□□ -2.14
HMBOX1-202ENST00000355231 SPRR2EP22531 72 aa1.69□□□□□ -2.14
HMBOX1-202ENST00000355231 SPRR2BP35325 72 aa1.69□□□□□ -2.14
HMBOX1-202ENST00000355231 SPRR2AP35326 72 aa1.69□□□□□ -2.14
HMBOX1-202ENST00000355231 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
HMBOX1-202ENST00000355231 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
HMBOX1-202ENST00000355231 SPRR2DP22532 72 aa1.65□□□□□ -2.15
HMBOX1-202ENST00000355231 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
HMBOX1-202ENST00000355231 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
HMBOX1-202ENST00000355231 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
HMBOX1-202ENST00000355231 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
HMBOX1-202ENST00000355231 MT1EP04732 61 aa1.58□□□□□ -2.16
HMBOX1-202ENST00000355231 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
HMBOX1-202ENST00000355231 MT1LQ93083 61 aa1.56□□□□□ -2.16
HMBOX1-202ENST00000355231 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
HMBOX1-202ENST00000355231 MT1GP13640 62 aa1.48□□□□□ -2.17
HMBOX1-202ENST00000355231 MT1AP04731 61 aa1.48□□□□□ -2.17
HMBOX1-202ENST00000355231 MT1MQ8N339 61 aa1.48□□□□□ -2.17
HMBOX1-202ENST00000355231 PRM1P04553 51 aa1.47□□□□□ -2.17
HMBOX1-202ENST00000355231 MT4P47944 62 aa1.45□□□□□ -2.18
HMBOX1-202ENST00000355231 LCE3DQ9BYE3 92 aa1.4□□□□□ -2.19
HMBOX1-202ENST00000355231 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
HMBOX1-202ENST00000355231 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
HMBOX1-202ENST00000355231 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.19
HMBOX1-202ENST00000355231 KRTAP6-1Q3LI64 71 aa1.31□□□□□ -2.2
HMBOX1-202ENST00000355231 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
HMBOX1-202ENST00000355231 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
HMBOX1-202ENST00000355231 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
HMBOX1-202ENST00000355231 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
HMBOX1-202ENST00000355231 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
HMBOX1-202ENST00000355231 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
HMBOX1-202ENST00000355231 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
HMBOX1-202ENST00000355231 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 90.9 ms