RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
LIMS2-202ENST00000355119 KRTAP9-6A0A140TA67 174 aa7.37□□□□□ -1.23
LIMS2-202ENST00000355119 KRTAP2-3P0C7H8 128 aa7.31□□□□□ -1.24
LIMS2-202ENST00000355119 KRTAP2-4Q9BYR9 128 aa7.31□□□□□ -1.24
LIMS2-202ENST00000355119 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
LIMS2-202ENST00000355119 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
LIMS2-202ENST00000355119 KRTAP19-3Q7Z4W3 81 aa7.22□□□□□ -1.25
LIMS2-202ENST00000355119 MT1GP13640 62 aa7.2□□□□□ -1.26
LIMS2-202ENST00000355119 MT1MQ8N339 61 aa7.17□□□□□ -1.26
LIMS2-202ENST00000355119 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
LIMS2-202ENST00000355119 KRTAP4-3Q9BYR4 195 aa7.12□□□□□ -1.27
LIMS2-202ENST00000355119 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
LIMS2-202ENST00000355119 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
LIMS2-202ENST00000355119 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
LIMS2-202ENST00000355119 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
LIMS2-202ENST00000355119 MUC12Q9UKN1 5478 aa6.88□□□□□ -1.31
LIMS2-202ENST00000355119 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.33
LIMS2-202ENST00000355119 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
LIMS2-202ENST00000355119 KRTAP5-9P26371 169 aa6.64□□□□□ -1.35
LIMS2-202ENST00000355119 KRTAP6-3Q3LI67 103 aa6.64□□□□□ -1.35
LIMS2-202ENST00000355119 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.36
LIMS2-202ENST00000355119 SPRR2EP22531 72 aa6.46□□□□□ -1.38
LIMS2-202ENST00000355119 SPRR2BP35325 72 aa6.46□□□□□ -1.38
LIMS2-202ENST00000355119 SPRR2AP35326 72 aa6.46□□□□□ -1.38
LIMS2-202ENST00000355119 MT1AP04731 61 aa6.45□□□□□ -1.38
LIMS2-202ENST00000355119 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
LIMS2-202ENST00000355119 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
LIMS2-202ENST00000355119 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
LIMS2-202ENST00000355119 NEBP20929 6669 aa6.38□□□□□ -1.39
LIMS2-202ENST00000355119 KRTAP5-5Q701N2 237 aaPredicted RBP6.37□□□□□ -1.39
LIMS2-202ENST00000355119 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
LIMS2-202ENST00000355119 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.41
LIMS2-202ENST00000355119 SPRR2DP22532 72 aa6.2□□□□□ -1.42
LIMS2-202ENST00000355119 LCE3DQ9BYE3 92 aa6.09□□□□□ -1.43
LIMS2-202ENST00000355119 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
LIMS2-202ENST00000355119 LCE3EQ5T5B0 92 aa6.01□□□□□ -1.45
LIMS2-202ENST00000355119 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
LIMS2-202ENST00000355119 KRTAP20-1Q3LI63 56 aa5.87□□□□□ -1.47
LIMS2-202ENST00000355119 MT3P25713 68 aa5.82□□□□□ -1.48
LIMS2-202ENST00000355119 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
LIMS2-202ENST00000355119 KRTAP2-2Q9BYT5 123 aa5.73□□□□□ -1.49
LIMS2-202ENST00000355119 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
LIMS2-202ENST00000355119 PRM1P04553 51 aa5.6□□□□□ -1.51
LIMS2-202ENST00000355119 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
LIMS2-202ENST00000355119 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
LIMS2-202ENST00000355119 MT4P47944 62 aa5.41□□□□□ -1.54
LIMS2-202ENST00000355119 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
LIMS2-202ENST00000355119 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
LIMS2-202ENST00000355119 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
LIMS2-202ENST00000355119 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
LIMS2-202ENST00000355119 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
LIMS2-202ENST00000355119 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
LIMS2-202ENST00000355119 LCE1EQ5T753 118 aa4.84□□□□□ -1.64
LIMS2-202ENST00000355119 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
LIMS2-202ENST00000355119 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
LIMS2-202ENST00000355119 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
LIMS2-202ENST00000355119 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
LIMS2-202ENST00000355119 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
LIMS2-202ENST00000355119 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
LIMS2-202ENST00000355119 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
LIMS2-202ENST00000355119 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
LIMS2-202ENST00000355119 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
LIMS2-202ENST00000355119 KRTAP5-8O75690 187 aa4.4□□□□□ -1.7
LIMS2-202ENST00000355119 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
LIMS2-202ENST00000355119 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
LIMS2-202ENST00000355119 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
LIMS2-202ENST00000355119 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
LIMS2-202ENST00000355119 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
LIMS2-202ENST00000355119 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
LIMS2-202ENST00000355119 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
LIMS2-202ENST00000355119 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
LIMS2-202ENST00000355119 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
LIMS2-202ENST00000355119 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
LIMS2-202ENST00000355119 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
LIMS2-202ENST00000355119 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
LIMS2-202ENST00000355119 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
LIMS2-202ENST00000355119 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 71.5 ms