RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
HTT-201ENST00000355072 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
HTT-201ENST00000355072 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
HTT-201ENST00000355072 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
HTT-201ENST00000355072 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
HTT-201ENST00000355072 MT4P47944 62 aa2.1□□□□□ -2.07
HTT-201ENST00000355072 RYR2Q92736 4967 aa2.07□□□□□ -2.08
HTT-201ENST00000355072 KRTAP9-4Q9BYQ2 154 aa2.05□□□□□ -2.08
HTT-201ENST00000355072 KRTAP9-2Q9BYQ4 174 aa2.05□□□□□ -2.08
HTT-201ENST00000355072 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
HTT-201ENST00000355072 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
HTT-201ENST00000355072 KRTAP2-2Q9BYT5 123 aa2.03□□□□□ -2.08
HTT-201ENST00000355072 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
HTT-201ENST00000355072 LPAP08519 4548 aa1.99□□□□□ -2.09
HTT-201ENST00000355072 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
HTT-201ENST00000355072 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
HTT-201ENST00000355072 LOC100996750A0A140TA64 210 aa1.95□□□□□ -2.1
HTT-201ENST00000355072 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
HTT-201ENST00000355072 KRTAP9-6A0A140TA67 174 aa1.94□□□□□ -2.1
HTT-201ENST00000355072 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
HTT-201ENST00000355072 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
HTT-201ENST00000355072 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
HTT-201ENST00000355072 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
HTT-201ENST00000355072 KRTAP17-1Q9BYP8 105 aa1.93□□□□□ -2.1
HTT-201ENST00000355072 LCE2AQ5TA79 106 aaPredicted RBP1.92□□□□□ -2.1
HTT-201ENST00000355072 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
HTT-201ENST00000355072 KRTAP9-7A8MTY7 169 aa1.91□□□□□ -2.1
HTT-201ENST00000355072 RNF213Q63HN8 5207 aa1.9□□□□□ -2.1
HTT-201ENST00000355072 ABCA13Q86UQ4 5058 aa1.9□□□□□ -2.1
HTT-201ENST00000355072 UBR4Q5T4S7 5183 aa1.9□□□□□ -2.11
HTT-201ENST00000355072 KIAA1109Q2LD37 5005 aa1.86□□□□□ -2.11
HTT-201ENST00000355072 KRTAP4-9Q9BYQ8 210 aa1.86□□□□□ -2.11
HTT-201ENST00000355072 MDN1Q9NU22 5596 aa1.84□□□□□ -2.11
HTT-201ENST00000355072 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
HTT-201ENST00000355072 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
HTT-201ENST00000355072 KMT2DO14686 5537 aa1.81□□□□□ -2.12
HTT-201ENST00000355072 KRTAP4-3Q9BYR4 195 aa1.81□□□□□ -2.12
HTT-201ENST00000355072 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
HTT-201ENST00000355072 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
HTT-201ENST00000355072 FSIP2Q5CZC0 6907 aa1.77□□□□□ -2.13
HTT-201ENST00000355072 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
HTT-201ENST00000355072 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
HTT-201ENST00000355072 OBSCNQ5VST9 7968 aa1.73□□□□□ -2.13
HTT-201ENST00000355072 FAT4Q6V0I7 4981 aa1.7□□□□□ -2.14
HTT-201ENST00000355072 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.66□□□□□ -2.14
HTT-201ENST00000355072 USH2AO75445 5202 aa1.61□□□□□ -2.15
HTT-201ENST00000355072 MUC2Q02817 5179 aa1.61□□□□□ -2.15
HTT-201ENST00000355072 NEBP20929 6669 aa1.58□□□□□ -2.16
HTT-201ENST00000355072 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
HTT-201ENST00000355072 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
HTT-201ENST00000355072 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
HTT-201ENST00000355072 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
HTT-201ENST00000355072 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
HTT-201ENST00000355072 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
HTT-201ENST00000355072 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
HTT-201ENST00000355072 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
HTT-201ENST00000355072 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
HTT-201ENST00000355072 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
HTT-201ENST00000355072 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
HTT-201ENST00000355072 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
HTT-201ENST00000355072 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
HTT-201ENST00000355072 KRTAP4-6Q9BYQ5 205 aa1.36□□□□□ -2.19
HTT-201ENST00000355072 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.2
HTT-201ENST00000355072 KRTAP4-12Q9BQ66 201 aa1.28□□□□□ -2.2
HTT-201ENST00000355072 KRTAP4-2Q9BYR5 136 aa1.28□□□□□ -2.2
HTT-201ENST00000355072 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.21
HTT-201ENST00000355072 KRTAP5-2Q701N4 177 aa1.26□□□□□ -2.21
HTT-201ENST00000355072 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
HTT-201ENST00000355072 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
HTT-201ENST00000355072 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
HTT-201ENST00000355072 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
HTT-201ENST00000355072 KRTAP5-8O75690 187 aa1.15□□□□□ -2.22
HTT-201ENST00000355072 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
HTT-201ENST00000355072 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
HTT-201ENST00000355072 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
HTT-201ENST00000355072 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
HTT-201ENST00000355072 KRTAP5-7Q6L8G8 165 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms