RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 SYNE2Q8WXH0 6885 aaKnown RBP7.53□□□□□ -1.2
PRKAA1-202ENST00000354209 KRTAP19-3Q7Z4W3 81 aa7.53□□□□□ -1.2
PRKAA1-202ENST00000354209 MT1GP13640 62 aa7.45□□□□□ -1.22
PRKAA1-202ENST00000354209 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
PRKAA1-202ENST00000354209 KRTAP6-3Q3LI67 103 aa7.42□□□□□ -1.22
PRKAA1-202ENST00000354209 LCE5AQ5TCM9 118 aa7.4□□□□□ -1.22
PRKAA1-202ENST00000354209 MT1MQ8N339 61 aa7.39□□□□□ -1.23
PRKAA1-202ENST00000354209 LCE1AQ5T7P2 110 aa7.34□□□□□ -1.23
PRKAA1-202ENST00000354209 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
PRKAA1-202ENST00000354209 MDN1Q9NU22 5596 aa7.26□□□□□ -1.25
PRKAA1-202ENST00000354209 SPRR2EP22531 72 aa7.25□□□□□ -1.25
PRKAA1-202ENST00000354209 SPRR2BP35325 72 aa7.25□□□□□ -1.25
PRKAA1-202ENST00000354209 SPRR2AP35326 72 aa7.25□□□□□ -1.25
PRKAA1-202ENST00000354209 KRTAP4-3Q9BYR4 195 aa7.24□□□□□ -1.25
PRKAA1-202ENST00000354209 KRTAP9-6A8MVA2 160 aa7.21□□□□□ -1.25
PRKAA1-202ENST00000354209 NDUFAF8A1L188 74 aa7.21□□□□□ -1.26
PRKAA1-202ENST00000354209 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.27
PRKAA1-202ENST00000354209 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
PRKAA1-202ENST00000354209 SPRR2DP22532 72 aa6.98□□□□□ -1.29
PRKAA1-202ENST00000354209 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.3
PRKAA1-202ENST00000354209 NEBP20929 6669 aa6.84□□□□□ -1.31
PRKAA1-202ENST00000354209 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
PRKAA1-202ENST00000354209 KRTAP5-5Q701N2 237 aaPredicted RBP6.68□□□□□ -1.34
PRKAA1-202ENST00000354209 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
PRKAA1-202ENST00000354209 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
PRKAA1-202ENST00000354209 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
PRKAA1-202ENST00000354209 MT1AP04731 61 aa6.53□□□□□ -1.36
PRKAA1-202ENST00000354209 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
PRKAA1-202ENST00000354209 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
PRKAA1-202ENST00000354209 KRTAP20-1Q3LI63 56 aa6.34□□□□□ -1.39
PRKAA1-202ENST00000354209 KRTAP2-2Q9BYT5 123 aa6.34□□□□□ -1.39
PRKAA1-202ENST00000354209 H3BS24 57 aa6.31□□□□□ -1.4
PRKAA1-202ENST00000354209 A0A0A0MQY5 61 aa6.29□□□□□ -1.4
PRKAA1-202ENST00000354209 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
PRKAA1-202ENST00000354209 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
PRKAA1-202ENST00000354209 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
PRKAA1-202ENST00000354209 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
PRKAA1-202ENST00000354209 MT4P47944 62 aa6.05□□□□□ -1.44
PRKAA1-202ENST00000354209 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
PRKAA1-202ENST00000354209 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
PRKAA1-202ENST00000354209 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
PRKAA1-202ENST00000354209 KRTAP6-2Q3LI66 62 aa5.95□□□□□ -1.46
PRKAA1-202ENST00000354209 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
PRKAA1-202ENST00000354209 INE1O15225 51 aa5.93□□□□□ -1.46
PRKAA1-202ENST00000354209 MT3P25713 68 aa5.9□□□□□ -1.46
PRKAA1-202ENST00000354209 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
PRKAA1-202ENST00000354209 KRTAP5-2Q701N4 177 aa5.78□□□□□ -1.48
PRKAA1-202ENST00000354209 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
PRKAA1-202ENST00000354209 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
PRKAA1-202ENST00000354209 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
PRKAA1-202ENST00000354209 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
PRKAA1-202ENST00000354209 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
PRKAA1-202ENST00000354209 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
PRKAA1-202ENST00000354209 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
PRKAA1-202ENST00000354209 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
PRKAA1-202ENST00000354209 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
PRKAA1-202ENST00000354209 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
PRKAA1-202ENST00000354209 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
PRKAA1-202ENST00000354209 PRM1P04553 51 aa4.85□□□□□ -1.63
PRKAA1-202ENST00000354209 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
PRKAA1-202ENST00000354209 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
PRKAA1-202ENST00000354209 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
PRKAA1-202ENST00000354209 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
PRKAA1-202ENST00000354209 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
PRKAA1-202ENST00000354209 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
PRKAA1-202ENST00000354209 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
PRKAA1-202ENST00000354209 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
PRKAA1-202ENST00000354209 KRTAP21-2Q3LI59 83 aa4.25□□□□□ -1.73
PRKAA1-202ENST00000354209 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
PRKAA1-202ENST00000354209 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
PRKAA1-202ENST00000354209 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
PRKAA1-202ENST00000354209 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
PRKAA1-202ENST00000354209 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
PRKAA1-202ENST00000354209 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
PRKAA1-202ENST00000354209 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
PRKAA1-202ENST00000354209 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
PRKAA1-202ENST00000354209 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms