RNA–Protein interactions for RNA: ENST00000352127.11

XRCC3-201, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-201ENST00000352127 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
XRCC3-201ENST00000352127 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
XRCC3-201ENST00000352127 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
XRCC3-201ENST00000352127 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
XRCC3-201ENST00000352127 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
XRCC3-201ENST00000352127 MT1GP13640 62 aa5.83□□□□□ -1.48
XRCC3-201ENST00000352127 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
XRCC3-201ENST00000352127 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
XRCC3-201ENST00000352127 MT1MQ8N339 61 aa5.74□□□□□ -1.49
XRCC3-201ENST00000352127 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
XRCC3-201ENST00000352127 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
XRCC3-201ENST00000352127 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
XRCC3-201ENST00000352127 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
XRCC3-201ENST00000352127 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
XRCC3-201ENST00000352127 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
XRCC3-201ENST00000352127 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
XRCC3-201ENST00000352127 LCE3BQ5TA77 95 aa5.4□□□□□ -1.55
XRCC3-201ENST00000352127 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
XRCC3-201ENST00000352127 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
XRCC3-201ENST00000352127 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
XRCC3-201ENST00000352127 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
XRCC3-201ENST00000352127 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
XRCC3-201ENST00000352127 MT1AP04731 61 aa5.1□□□□□ -1.59
XRCC3-201ENST00000352127 SPRR2EP22531 72 aa5.08□□□□□ -1.6
XRCC3-201ENST00000352127 SPRR2BP35325 72 aa5.08□□□□□ -1.6
XRCC3-201ENST00000352127 SPRR2AP35326 72 aa5.08□□□□□ -1.6
XRCC3-201ENST00000352127 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
XRCC3-201ENST00000352127 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
XRCC3-201ENST00000352127 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
XRCC3-201ENST00000352127 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
XRCC3-201ENST00000352127 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
XRCC3-201ENST00000352127 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
XRCC3-201ENST00000352127 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
XRCC3-201ENST00000352127 SPRR2DP22532 72 aa4.83□□□□□ -1.64
XRCC3-201ENST00000352127 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
XRCC3-201ENST00000352127 PRM1P04553 51 aa4.75□□□□□ -1.65
XRCC3-201ENST00000352127 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
XRCC3-201ENST00000352127 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
XRCC3-201ENST00000352127 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
XRCC3-201ENST00000352127 MT3P25713 68 aa4.57□□□□□ -1.68
XRCC3-201ENST00000352127 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
XRCC3-201ENST00000352127 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
XRCC3-201ENST00000352127 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
XRCC3-201ENST00000352127 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
XRCC3-201ENST00000352127 MT4P47944 62 aa4.37□□□□□ -1.71
XRCC3-201ENST00000352127 NEBP20929 6669 aa4.37□□□□□ -1.71
XRCC3-201ENST00000352127 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
XRCC3-201ENST00000352127 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
XRCC3-201ENST00000352127 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
XRCC3-201ENST00000352127 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
XRCC3-201ENST00000352127 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
XRCC3-201ENST00000352127 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
XRCC3-201ENST00000352127 MUC5ACP98088 5654 aa4□□□□□ -1.77
XRCC3-201ENST00000352127 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
XRCC3-201ENST00000352127 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
XRCC3-201ENST00000352127 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
XRCC3-201ENST00000352127 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
XRCC3-201ENST00000352127 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
XRCC3-201ENST00000352127 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
XRCC3-201ENST00000352127 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
XRCC3-201ENST00000352127 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
XRCC3-201ENST00000352127 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
XRCC3-201ENST00000352127 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
XRCC3-201ENST00000352127 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
XRCC3-201ENST00000352127 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
XRCC3-201ENST00000352127 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
XRCC3-201ENST00000352127 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
XRCC3-201ENST00000352127 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
XRCC3-201ENST00000352127 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.9
XRCC3-201ENST00000352127 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
XRCC3-201ENST00000352127 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
XRCC3-201ENST00000352127 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
XRCC3-201ENST00000352127 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
XRCC3-201ENST00000352127 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
XRCC3-201ENST00000352127 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
XRCC3-201ENST00000352127 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
XRCC3-201ENST00000352127 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms