RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
COG3-201ENST00000349995 KMT2DO14686 5537 aa4.86□□□□□ -1.63
COG3-201ENST00000349995 PRM1P04553 51 aa4.84□□□□□ -1.63
COG3-201ENST00000349995 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
COG3-201ENST00000349995 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
COG3-201ENST00000349995 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
COG3-201ENST00000349995 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
COG3-201ENST00000349995 SPRR2EP22531 72 aa4.78□□□□□ -1.64
COG3-201ENST00000349995 SPRR2BP35325 72 aa4.78□□□□□ -1.64
COG3-201ENST00000349995 SPRR2AP35326 72 aa4.78□□□□□ -1.64
COG3-201ENST00000349995 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
COG3-201ENST00000349995 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
COG3-201ENST00000349995 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
COG3-201ENST00000349995 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
COG3-201ENST00000349995 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
COG3-201ENST00000349995 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
COG3-201ENST00000349995 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
COG3-201ENST00000349995 MT1MQ8N339 61 aa4.65□□□□□ -1.66
COG3-201ENST00000349995 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
COG3-201ENST00000349995 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
COG3-201ENST00000349995 SPRR2DP22532 72 aa4.58□□□□□ -1.68
COG3-201ENST00000349995 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
COG3-201ENST00000349995 LCE2DQ5TA82 110 aaPredicted RBP4.54□□□□□ -1.68
COG3-201ENST00000349995 SSPOA2VEC9 5147 aa4.53□□□□□ -1.68
COG3-201ENST00000349995 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
COG3-201ENST00000349995 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
COG3-201ENST00000349995 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
COG3-201ENST00000349995 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
COG3-201ENST00000349995 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
COG3-201ENST00000349995 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
COG3-201ENST00000349995 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
COG3-201ENST00000349995 MT1AP04731 61 aa4.19□□□□□ -1.74
COG3-201ENST00000349995 KRTAP9-6A0A140TA67 174 aa4.17□□□□□ -1.74
COG3-201ENST00000349995 MT4P47944 62 aa4.17□□□□□ -1.74
COG3-201ENST00000349995 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
COG3-201ENST00000349995 MT3P25713 68 aa4.14□□□□□ -1.75
COG3-201ENST00000349995 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
COG3-201ENST00000349995 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
COG3-201ENST00000349995 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
COG3-201ENST00000349995 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
COG3-201ENST00000349995 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
COG3-201ENST00000349995 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
COG3-201ENST00000349995 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
COG3-201ENST00000349995 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
COG3-201ENST00000349995 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
COG3-201ENST00000349995 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
COG3-201ENST00000349995 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
COG3-201ENST00000349995 NEBP20929 6669 aa3.63□□□□□ -1.83
COG3-201ENST00000349995 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
COG3-201ENST00000349995 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
COG3-201ENST00000349995 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
COG3-201ENST00000349995 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
COG3-201ENST00000349995 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
COG3-201ENST00000349995 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
COG3-201ENST00000349995 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
COG3-201ENST00000349995 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
COG3-201ENST00000349995 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
COG3-201ENST00000349995 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
COG3-201ENST00000349995 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
COG3-201ENST00000349995 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
COG3-201ENST00000349995 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
COG3-201ENST00000349995 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
COG3-201ENST00000349995 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
COG3-201ENST00000349995 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
COG3-201ENST00000349995 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
COG3-201ENST00000349995 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
COG3-201ENST00000349995 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
COG3-201ENST00000349995 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
COG3-201ENST00000349995 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
COG3-201ENST00000349995 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
COG3-201ENST00000349995 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
COG3-201ENST00000349995 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
COG3-201ENST00000349995 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
COG3-201ENST00000349995 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
COG3-201ENST00000349995 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
COG3-201ENST00000349995 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
COG3-201ENST00000349995 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 153.6 ms