RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
HDAC10-202ENST00000349505 MACF1Q9UPN3 7388 aaKnown RBP6.11□□□□□ -1.43
HDAC10-202ENST00000349505 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
HDAC10-202ENST00000349505 KRTAP9-6A0A140TA67 174 aa6.09□□□□□ -1.43
HDAC10-202ENST00000349505 MT1GP13640 62 aa6.08□□□□□ -1.44
HDAC10-202ENST00000349505 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
HDAC10-202ENST00000349505 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
HDAC10-202ENST00000349505 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
HDAC10-202ENST00000349505 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
HDAC10-202ENST00000349505 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
HDAC10-202ENST00000349505 MT1MQ8N339 61 aa6.02□□□□□ -1.45
HDAC10-202ENST00000349505 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
HDAC10-202ENST00000349505 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
HDAC10-202ENST00000349505 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
HDAC10-202ENST00000349505 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
HDAC10-202ENST00000349505 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
HDAC10-202ENST00000349505 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
HDAC10-202ENST00000349505 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
HDAC10-202ENST00000349505 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.75□□□□□ -1.49
HDAC10-202ENST00000349505 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
HDAC10-202ENST00000349505 SPRR2EP22531 72 aa5.66□□□□□ -1.5
HDAC10-202ENST00000349505 SPRR2BP35325 72 aa5.66□□□□□ -1.5
HDAC10-202ENST00000349505 SPRR2AP35326 72 aa5.66□□□□□ -1.5
HDAC10-202ENST00000349505 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
HDAC10-202ENST00000349505 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
HDAC10-202ENST00000349505 SPRR2DP22532 72 aa5.44□□□□□ -1.54
HDAC10-202ENST00000349505 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
HDAC10-202ENST00000349505 MT1AP04731 61 aa5.37□□□□□ -1.55
HDAC10-202ENST00000349505 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
HDAC10-202ENST00000349505 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
HDAC10-202ENST00000349505 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
HDAC10-202ENST00000349505 NEBP20929 6669 aa5.24□□□□□ -1.57
HDAC10-202ENST00000349505 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
HDAC10-202ENST00000349505 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
HDAC10-202ENST00000349505 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
HDAC10-202ENST00000349505 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
HDAC10-202ENST00000349505 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
HDAC10-202ENST00000349505 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
HDAC10-202ENST00000349505 MT3P25713 68 aa4.86□□□□□ -1.63
HDAC10-202ENST00000349505 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
HDAC10-202ENST00000349505 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
HDAC10-202ENST00000349505 LCE4AQ5TA78 99 aa4.84□□□□□ -1.64
HDAC10-202ENST00000349505 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
HDAC10-202ENST00000349505 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
HDAC10-202ENST00000349505 MT4P47944 62 aa4.71□□□□□ -1.66
HDAC10-202ENST00000349505 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
HDAC10-202ENST00000349505 PRM1P04553 51 aa4.65□□□□□ -1.66
HDAC10-202ENST00000349505 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
HDAC10-202ENST00000349505 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
HDAC10-202ENST00000349505 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
HDAC10-202ENST00000349505 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
HDAC10-202ENST00000349505 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
HDAC10-202ENST00000349505 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
HDAC10-202ENST00000349505 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
HDAC10-202ENST00000349505 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.77
HDAC10-202ENST00000349505 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
HDAC10-202ENST00000349505 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
HDAC10-202ENST00000349505 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
HDAC10-202ENST00000349505 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
HDAC10-202ENST00000349505 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
HDAC10-202ENST00000349505 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
HDAC10-202ENST00000349505 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
HDAC10-202ENST00000349505 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
HDAC10-202ENST00000349505 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
HDAC10-202ENST00000349505 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
HDAC10-202ENST00000349505 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
HDAC10-202ENST00000349505 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
HDAC10-202ENST00000349505 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
HDAC10-202ENST00000349505 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
HDAC10-202ENST00000349505 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
HDAC10-202ENST00000349505 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
HDAC10-202ENST00000349505 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
HDAC10-202ENST00000349505 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
HDAC10-202ENST00000349505 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
HDAC10-202ENST00000349505 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
HDAC10-202ENST00000349505 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
HDAC10-202ENST00000349505 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 491.4 ms