RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
CHRNA3-202ENST00000348639 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
CHRNA3-202ENST00000348639 KRTAP9-6A8MVA2 160 aa7.01□□□□□ -1.29
CHRNA3-202ENST00000348639 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
CHRNA3-202ENST00000348639 MUC12Q9UKN1 5478 aa6.94□□□□□ -1.3
CHRNA3-202ENST00000348639 SPRR2FQ96RM1 72 aa6.88□□□□□ -1.31
CHRNA3-202ENST00000348639 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
CHRNA3-202ENST00000348639 MT1GP13640 62 aa6.84□□□□□ -1.31
CHRNA3-202ENST00000348639 MT1MQ8N339 61 aa6.79□□□□□ -1.32
CHRNA3-202ENST00000348639 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.32
CHRNA3-202ENST00000348639 KRTAP5-9P26371 169 aa6.75□□□□□ -1.33
CHRNA3-202ENST00000348639 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
CHRNA3-202ENST00000348639 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
CHRNA3-202ENST00000348639 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
CHRNA3-202ENST00000348639 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
CHRNA3-202ENST00000348639 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
CHRNA3-202ENST00000348639 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
CHRNA3-202ENST00000348639 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
CHRNA3-202ENST00000348639 MDN1Q9NU22 5596 aa6.6□□□□□ -1.35
CHRNA3-202ENST00000348639 DSTQ03001 7570 aaKnown RBP6.57□□□□□ -1.36
CHRNA3-202ENST00000348639 INE1O15225 51 aa6.55□□□□□ -1.36
CHRNA3-202ENST00000348639 LCE1AQ5T7P2 110 aa6.5□□□□□ -1.37
CHRNA3-202ENST00000348639 SPRR2EP22531 72 aa6.47□□□□□ -1.37
CHRNA3-202ENST00000348639 SPRR2BP35325 72 aa6.47□□□□□ -1.37
CHRNA3-202ENST00000348639 SPRR2AP35326 72 aa6.47□□□□□ -1.37
CHRNA3-202ENST00000348639 NEBP20929 6669 aa6.38□□□□□ -1.39
CHRNA3-202ENST00000348639 SPRR2DP22532 72 aa6.23□□□□□ -1.41
CHRNA3-202ENST00000348639 KRTAP5-5Q701N2 237 aaPredicted RBP6.08□□□□□ -1.44
CHRNA3-202ENST00000348639 MT1AP04731 61 aa6.07□□□□□ -1.44
CHRNA3-202ENST00000348639 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
CHRNA3-202ENST00000348639 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
CHRNA3-202ENST00000348639 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.47
CHRNA3-202ENST00000348639 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
CHRNA3-202ENST00000348639 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
CHRNA3-202ENST00000348639 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
CHRNA3-202ENST00000348639 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
CHRNA3-202ENST00000348639 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
CHRNA3-202ENST00000348639 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
CHRNA3-202ENST00000348639 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
CHRNA3-202ENST00000348639 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
CHRNA3-202ENST00000348639 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
CHRNA3-202ENST00000348639 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
CHRNA3-202ENST00000348639 MT3P25713 68 aa5.48□□□□□ -1.53
CHRNA3-202ENST00000348639 MT4P47944 62 aa5.45□□□□□ -1.54
CHRNA3-202ENST00000348639 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
CHRNA3-202ENST00000348639 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.55
CHRNA3-202ENST00000348639 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
CHRNA3-202ENST00000348639 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
CHRNA3-202ENST00000348639 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
CHRNA3-202ENST00000348639 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
CHRNA3-202ENST00000348639 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CHRNA3-202ENST00000348639 PRM1P04553 51 aa5.01□□□□□ -1.61
CHRNA3-202ENST00000348639 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
CHRNA3-202ENST00000348639 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
CHRNA3-202ENST00000348639 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
CHRNA3-202ENST00000348639 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
CHRNA3-202ENST00000348639 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
CHRNA3-202ENST00000348639 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
CHRNA3-202ENST00000348639 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
CHRNA3-202ENST00000348639 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
CHRNA3-202ENST00000348639 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.7
CHRNA3-202ENST00000348639 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
CHRNA3-202ENST00000348639 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
CHRNA3-202ENST00000348639 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
CHRNA3-202ENST00000348639 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
CHRNA3-202ENST00000348639 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
CHRNA3-202ENST00000348639 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
CHRNA3-202ENST00000348639 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
CHRNA3-202ENST00000348639 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
CHRNA3-202ENST00000348639 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
CHRNA3-202ENST00000348639 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
CHRNA3-202ENST00000348639 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CHRNA3-202ENST00000348639 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
CHRNA3-202ENST00000348639 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
CHRNA3-202ENST00000348639 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
CHRNA3-202ENST00000348639 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
CHRNA3-202ENST00000348639 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 210.4 ms