RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
SMTN-202ENST00000347557 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
SMTN-202ENST00000347557 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
SMTN-202ENST00000347557 MT1GP13640 62 aa4.82□□□□□ -1.64
SMTN-202ENST00000347557 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
SMTN-202ENST00000347557 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
SMTN-202ENST00000347557 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
SMTN-202ENST00000347557 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
SMTN-202ENST00000347557 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SMTN-202ENST00000347557 MT1MQ8N339 61 aa4.65□□□□□ -1.66
SMTN-202ENST00000347557 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
SMTN-202ENST00000347557 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
SMTN-202ENST00000347557 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
SMTN-202ENST00000347557 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
SMTN-202ENST00000347557 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
SMTN-202ENST00000347557 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
SMTN-202ENST00000347557 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
SMTN-202ENST00000347557 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
SMTN-202ENST00000347557 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
SMTN-202ENST00000347557 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
SMTN-202ENST00000347557 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
SMTN-202ENST00000347557 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
SMTN-202ENST00000347557 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
SMTN-202ENST00000347557 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
SMTN-202ENST00000347557 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
SMTN-202ENST00000347557 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
SMTN-202ENST00000347557 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
SMTN-202ENST00000347557 MT1AP04731 61 aa4.14□□□□□ -1.75
SMTN-202ENST00000347557 PRM1P04553 51 aa4.11□□□□□ -1.75
SMTN-202ENST00000347557 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
SMTN-202ENST00000347557 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
SMTN-202ENST00000347557 SPRR2EP22531 72 aa4.1□□□□□ -1.75
SMTN-202ENST00000347557 SPRR2BP35325 72 aa4.1□□□□□ -1.75
SMTN-202ENST00000347557 SPRR2AP35326 72 aa4.1□□□□□ -1.75
SMTN-202ENST00000347557 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
SMTN-202ENST00000347557 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
SMTN-202ENST00000347557 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
SMTN-202ENST00000347557 SPRR2DP22532 72 aa3.9□□□□□ -1.79
SMTN-202ENST00000347557 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
SMTN-202ENST00000347557 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
SMTN-202ENST00000347557 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
SMTN-202ENST00000347557 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
SMTN-202ENST00000347557 MT3P25713 68 aa3.76□□□□□ -1.81
SMTN-202ENST00000347557 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
SMTN-202ENST00000347557 MT4P47944 62 aa3.57□□□□□ -1.84
SMTN-202ENST00000347557 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
SMTN-202ENST00000347557 NEBP20929 6669 aa3.49□□□□□ -1.85
SMTN-202ENST00000347557 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
SMTN-202ENST00000347557 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
SMTN-202ENST00000347557 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
SMTN-202ENST00000347557 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
SMTN-202ENST00000347557 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SMTN-202ENST00000347557 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
SMTN-202ENST00000347557 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
SMTN-202ENST00000347557 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
SMTN-202ENST00000347557 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
SMTN-202ENST00000347557 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
SMTN-202ENST00000347557 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
SMTN-202ENST00000347557 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
SMTN-202ENST00000347557 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
SMTN-202ENST00000347557 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
SMTN-202ENST00000347557 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
SMTN-202ENST00000347557 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
SMTN-202ENST00000347557 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
SMTN-202ENST00000347557 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
SMTN-202ENST00000347557 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
SMTN-202ENST00000347557 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
SMTN-202ENST00000347557 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.98
SMTN-202ENST00000347557 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
SMTN-202ENST00000347557 KRTAP5-8O75690 187 aa2.56□□□□□ -2
SMTN-202ENST00000347557 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
SMTN-202ENST00000347557 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2.01
SMTN-202ENST00000347557 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
SMTN-202ENST00000347557 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SMTN-202ENST00000347557 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SMTN-202ENST00000347557 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
SMTN-202ENST00000347557 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms