RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
SKAP2-201ENST00000345317 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
SKAP2-201ENST00000345317 KRTAP19-6Q3LI70 58 aa3.05□□□□□ -1.92
SKAP2-201ENST00000345317 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
SKAP2-201ENST00000345317 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
SKAP2-201ENST00000345317 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
SKAP2-201ENST00000345317 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
SKAP2-201ENST00000345317 MT1EP04732 61 aa2.99□□□□□ -1.93
SKAP2-201ENST00000345317 MT1GP13640 62 aa2.99□□□□□ -1.93
SKAP2-201ENST00000345317 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
SKAP2-201ENST00000345317 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
SKAP2-201ENST00000345317 MT1LQ93083 61 aa2.97□□□□□ -1.93
SKAP2-201ENST00000345317 KRTAP9-6A0A140TA67 174 aa2.95□□□□□ -1.94
SKAP2-201ENST00000345317 SPRR2EP22531 72 aa2.94□□□□□ -1.94
SKAP2-201ENST00000345317 SPRR2BP35325 72 aa2.94□□□□□ -1.94
SKAP2-201ENST00000345317 SPRR2AP35326 72 aa2.94□□□□□ -1.94
SKAP2-201ENST00000345317 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
SKAP2-201ENST00000345317 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
SKAP2-201ENST00000345317 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
SKAP2-201ENST00000345317 MT1MQ8N339 61 aa2.85□□□□□ -1.95
SKAP2-201ENST00000345317 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
SKAP2-201ENST00000345317 LCE3BQ5TA77 95 aa2.82□□□□□ -1.96
SKAP2-201ENST00000345317 SPRR2DP22532 72 aa2.81□□□□□ -1.96
SKAP2-201ENST00000345317 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
SKAP2-201ENST00000345317 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
SKAP2-201ENST00000345317 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
SKAP2-201ENST00000345317 KRTAP4-9Q9BYQ8 210 aa2.73□□□□□ -1.97
SKAP2-201ENST00000345317 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
SKAP2-201ENST00000345317 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
SKAP2-201ENST00000345317 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
SKAP2-201ENST00000345317 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
SKAP2-201ENST00000345317 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
SKAP2-201ENST00000345317 LCE5AQ5TCM9 118 aa2.68□□□□□ -1.98
SKAP2-201ENST00000345317 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
SKAP2-201ENST00000345317 KRTAP9-7A8MTY7 169 aa2.62□□□□□ -1.99
SKAP2-201ENST00000345317 MT4P47944 62 aa2.59□□□□□ -2
SKAP2-201ENST00000345317 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
SKAP2-201ENST00000345317 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
SKAP2-201ENST00000345317 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
SKAP2-201ENST00000345317 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
SKAP2-201ENST00000345317 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
SKAP2-201ENST00000345317 MT1AP04731 61 aa2.51□□□□□ -2.01
SKAP2-201ENST00000345317 PRM1P04553 51 aa2.5□□□□□ -2.01
SKAP2-201ENST00000345317 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
SKAP2-201ENST00000345317 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
SKAP2-201ENST00000345317 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
SKAP2-201ENST00000345317 MT3P25713 68 aa2.41□□□□□ -2.02
SKAP2-201ENST00000345317 NEBP20929 6669 aa2.38□□□□□ -2.03
SKAP2-201ENST00000345317 KRTAP20-1Q3LI63 56 aa2.35□□□□□ -2.03
SKAP2-201ENST00000345317 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
SKAP2-201ENST00000345317 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
SKAP2-201ENST00000345317 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
SKAP2-201ENST00000345317 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
SKAP2-201ENST00000345317 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
SKAP2-201ENST00000345317 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
SKAP2-201ENST00000345317 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
SKAP2-201ENST00000345317 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
SKAP2-201ENST00000345317 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
SKAP2-201ENST00000345317 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
SKAP2-201ENST00000345317 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SKAP2-201ENST00000345317 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
SKAP2-201ENST00000345317 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
SKAP2-201ENST00000345317 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
SKAP2-201ENST00000345317 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
SKAP2-201ENST00000345317 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
SKAP2-201ENST00000345317 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SKAP2-201ENST00000345317 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
SKAP2-201ENST00000345317 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
SKAP2-201ENST00000345317 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
SKAP2-201ENST00000345317 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
SKAP2-201ENST00000345317 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
SKAP2-201ENST00000345317 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
SKAP2-201ENST00000345317 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
SKAP2-201ENST00000345317 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
SKAP2-201ENST00000345317 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
SKAP2-201ENST00000345317 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
SKAP2-201ENST00000345317 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 104.1 ms