RNA–Protein interactions for RNA: ENST00000345239.6

GFM2-202, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 1 (best) BASIC

Gene GFM2, Length 2,856 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-202ENST00000345239 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
GFM2-202ENST00000345239 KMT2DO14686 5537 aa3.34□□□□□ -1.87
GFM2-202ENST00000345239 MT1LQ93083 61 aa3.29□□□□□ -1.88
GFM2-202ENST00000345239 SPRR2FQ96RM1 72 aa3.28□□□□□ -1.88
GFM2-202ENST00000345239 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
GFM2-202ENST00000345239 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
GFM2-202ENST00000345239 MT1GP13640 62 aa3.23□□□□□ -1.89
GFM2-202ENST00000345239 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
GFM2-202ENST00000345239 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
GFM2-202ENST00000345239 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
GFM2-202ENST00000345239 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
GFM2-202ENST00000345239 MT1MQ8N339 61 aa3.17□□□□□ -1.9
GFM2-202ENST00000345239 SPRR2EP22531 72 aa3.16□□□□□ -1.9
GFM2-202ENST00000345239 SPRR2BP35325 72 aa3.16□□□□□ -1.9
GFM2-202ENST00000345239 SPRR2AP35326 72 aa3.16□□□□□ -1.9
GFM2-202ENST00000345239 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
GFM2-202ENST00000345239 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
GFM2-202ENST00000345239 KRTAP4-7Q9BYR0 210 aa3.1□□□□□ -1.91
GFM2-202ENST00000345239 NEBP20929 6669 aa3.1□□□□□ -1.91
GFM2-202ENST00000345239 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
GFM2-202ENST00000345239 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
GFM2-202ENST00000345239 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
GFM2-202ENST00000345239 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
GFM2-202ENST00000345239 SPRR2DP22532 72 aa3.06□□□□□ -1.92
GFM2-202ENST00000345239 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
GFM2-202ENST00000345239 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
GFM2-202ENST00000345239 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
GFM2-202ENST00000345239 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
GFM2-202ENST00000345239 LOC100996750A0A140TA64 210 aa2.87□□□□□ -1.95
GFM2-202ENST00000345239 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
GFM2-202ENST00000345239 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
GFM2-202ENST00000345239 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
GFM2-202ENST00000345239 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
GFM2-202ENST00000345239 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
GFM2-202ENST00000345239 MT1AP04731 61 aa2.82□□□□□ -1.96
GFM2-202ENST00000345239 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
GFM2-202ENST00000345239 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
GFM2-202ENST00000345239 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
GFM2-202ENST00000345239 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
GFM2-202ENST00000345239 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
GFM2-202ENST00000345239 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
GFM2-202ENST00000345239 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
GFM2-202ENST00000345239 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
GFM2-202ENST00000345239 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
GFM2-202ENST00000345239 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
GFM2-202ENST00000345239 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
GFM2-202ENST00000345239 PRM1P04553 51 aa2.58□□□□□ -2
GFM2-202ENST00000345239 MT4P47944 62 aa2.58□□□□□ -2
GFM2-202ENST00000345239 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
GFM2-202ENST00000345239 MT3P25713 68 aa2.54□□□□□ -2
GFM2-202ENST00000345239 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
GFM2-202ENST00000345239 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
GFM2-202ENST00000345239 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
GFM2-202ENST00000345239 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
GFM2-202ENST00000345239 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
GFM2-202ENST00000345239 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
GFM2-202ENST00000345239 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
GFM2-202ENST00000345239 KRTAP4-11Q9BYQ6 195 aa2.26□□□□□ -2.05
GFM2-202ENST00000345239 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
GFM2-202ENST00000345239 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
GFM2-202ENST00000345239 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
GFM2-202ENST00000345239 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
GFM2-202ENST00000345239 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
GFM2-202ENST00000345239 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
GFM2-202ENST00000345239 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
GFM2-202ENST00000345239 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
GFM2-202ENST00000345239 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
GFM2-202ENST00000345239 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
GFM2-202ENST00000345239 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
GFM2-202ENST00000345239 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
GFM2-202ENST00000345239 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
GFM2-202ENST00000345239 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
GFM2-202ENST00000345239 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
GFM2-202ENST00000345239 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
GFM2-202ENST00000345239 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
GFM2-202ENST00000345239 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
GFM2-202ENST00000345239 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms