RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
AP3D1-201ENST00000345016 SPRR2DP22532 72 aa5.32□□□□□ -1.56
AP3D1-201ENST00000345016 MT1EP04732 61 aa5.32□□□□□ -1.56
AP3D1-201ENST00000345016 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
AP3D1-201ENST00000345016 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
AP3D1-201ENST00000345016 PRM1P04553 51 aa5.15□□□□□ -1.59
AP3D1-201ENST00000345016 MT1MQ8N339 61 aa5.14□□□□□ -1.59
AP3D1-201ENST00000345016 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
AP3D1-201ENST00000345016 MT3P25713 68 aa5.02□□□□□ -1.61
AP3D1-201ENST00000345016 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
AP3D1-201ENST00000345016 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
AP3D1-201ENST00000345016 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
AP3D1-201ENST00000345016 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
AP3D1-201ENST00000345016 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
AP3D1-201ENST00000345016 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
AP3D1-201ENST00000345016 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
AP3D1-201ENST00000345016 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
AP3D1-201ENST00000345016 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
AP3D1-201ENST00000345016 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
AP3D1-201ENST00000345016 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
AP3D1-201ENST00000345016 USH2AO75445 5202 aa4.86□□□□□ -1.63
AP3D1-201ENST00000345016 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
AP3D1-201ENST00000345016 MT4P47944 62 aa4.8□□□□□ -1.64
AP3D1-201ENST00000345016 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
AP3D1-201ENST00000345016 MT1AP04731 61 aa4.79□□□□□ -1.64
AP3D1-201ENST00000345016 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
AP3D1-201ENST00000345016 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
AP3D1-201ENST00000345016 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
AP3D1-201ENST00000345016 KMT2DO14686 5537 aa4.73□□□□□ -1.65
AP3D1-201ENST00000345016 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
AP3D1-201ENST00000345016 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
AP3D1-201ENST00000345016 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
AP3D1-201ENST00000345016 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
AP3D1-201ENST00000345016 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
AP3D1-201ENST00000345016 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
AP3D1-201ENST00000345016 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
AP3D1-201ENST00000345016 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.7
AP3D1-201ENST00000345016 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
AP3D1-201ENST00000345016 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
AP3D1-201ENST00000345016 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
AP3D1-201ENST00000345016 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
AP3D1-201ENST00000345016 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
AP3D1-201ENST00000345016 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
AP3D1-201ENST00000345016 MDN1Q9NU22 5596 aa4.15□□□□□ -1.74
AP3D1-201ENST00000345016 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
AP3D1-201ENST00000345016 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
AP3D1-201ENST00000345016 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
AP3D1-201ENST00000345016 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
AP3D1-201ENST00000345016 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
AP3D1-201ENST00000345016 NEBP20929 6669 aa3.8□□□□□ -1.8
AP3D1-201ENST00000345016 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
AP3D1-201ENST00000345016 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
AP3D1-201ENST00000345016 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
AP3D1-201ENST00000345016 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
AP3D1-201ENST00000345016 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
AP3D1-201ENST00000345016 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
AP3D1-201ENST00000345016 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
AP3D1-201ENST00000345016 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
AP3D1-201ENST00000345016 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
AP3D1-201ENST00000345016 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
AP3D1-201ENST00000345016 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
AP3D1-201ENST00000345016 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
AP3D1-201ENST00000345016 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
AP3D1-201ENST00000345016 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
AP3D1-201ENST00000345016 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
AP3D1-201ENST00000345016 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
AP3D1-201ENST00000345016 KRTAP5-8O75690 187 aa2.65□□□□□ -1.98
AP3D1-201ENST00000345016 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
AP3D1-201ENST00000345016 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
AP3D1-201ENST00000345016 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
AP3D1-201ENST00000345016 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
AP3D1-201ENST00000345016 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
AP3D1-201ENST00000345016 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
AP3D1-201ENST00000345016 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
AP3D1-201ENST00000345016 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
AP3D1-201ENST00000345016 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
AP3D1-201ENST00000345016 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms