RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
RBM38-202ENST00000344785 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
RBM38-202ENST00000344785 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
RBM38-202ENST00000344785 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
RBM38-202ENST00000344785 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
RBM38-202ENST00000344785 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
RBM38-202ENST00000344785 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
RBM38-202ENST00000344785 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.41
RBM38-202ENST00000344785 MT1MQ8N339 61 aa6.18□□□□□ -1.42
RBM38-202ENST00000344785 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
RBM38-202ENST00000344785 MT1GP13640 62 aa6.15□□□□□ -1.43
RBM38-202ENST00000344785 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
RBM38-202ENST00000344785 DSTQ03001 7570 aaKnown RBP6.12□□□□□ -1.43
RBM38-202ENST00000344785 INE1O15225 51 aa6.1□□□□□ -1.43
RBM38-202ENST00000344785 MDN1Q9NU22 5596 aa6.09□□□□□ -1.44
RBM38-202ENST00000344785 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
RBM38-202ENST00000344785 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
RBM38-202ENST00000344785 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
RBM38-202ENST00000344785 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
RBM38-202ENST00000344785 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
RBM38-202ENST00000344785 KRTAP6-3Q3LI67 103 aa5.99□□□□□ -1.45
RBM38-202ENST00000344785 KRTAP5-9P26371 169 aa5.96□□□□□ -1.46
RBM38-202ENST00000344785 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
RBM38-202ENST00000344785 SPRR2EP22531 72 aa5.72□□□□□ -1.49
RBM38-202ENST00000344785 SPRR2BP35325 72 aa5.72□□□□□ -1.49
RBM38-202ENST00000344785 SPRR2AP35326 72 aa5.72□□□□□ -1.49
RBM38-202ENST00000344785 NEBP20929 6669 aa5.71□□□□□ -1.5
RBM38-202ENST00000344785 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
RBM38-202ENST00000344785 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
RBM38-202ENST00000344785 SPRR2DP22532 72 aa5.51□□□□□ -1.53
RBM38-202ENST00000344785 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
RBM38-202ENST00000344785 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
RBM38-202ENST00000344785 MT1AP04731 61 aa5.47□□□□□ -1.53
RBM38-202ENST00000344785 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
RBM38-202ENST00000344785 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
RBM38-202ENST00000344785 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
RBM38-202ENST00000344785 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
RBM38-202ENST00000344785 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
RBM38-202ENST00000344785 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
RBM38-202ENST00000344785 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
RBM38-202ENST00000344785 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
RBM38-202ENST00000344785 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
RBM38-202ENST00000344785 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
RBM38-202ENST00000344785 MT3P25713 68 aa4.91□□□□□ -1.62
RBM38-202ENST00000344785 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
RBM38-202ENST00000344785 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
RBM38-202ENST00000344785 MT4P47944 62 aa4.85□□□□□ -1.63
RBM38-202ENST00000344785 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
RBM38-202ENST00000344785 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
RBM38-202ENST00000344785 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
RBM38-202ENST00000344785 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
RBM38-202ENST00000344785 PRM1P04553 51 aa4.57□□□□□ -1.68
RBM38-202ENST00000344785 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
RBM38-202ENST00000344785 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
RBM38-202ENST00000344785 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
RBM38-202ENST00000344785 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.75
RBM38-202ENST00000344785 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
RBM38-202ENST00000344785 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
RBM38-202ENST00000344785 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
RBM38-202ENST00000344785 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
RBM38-202ENST00000344785 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
RBM38-202ENST00000344785 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
RBM38-202ENST00000344785 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
RBM38-202ENST00000344785 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
RBM38-202ENST00000344785 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
RBM38-202ENST00000344785 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
RBM38-202ENST00000344785 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
RBM38-202ENST00000344785 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
RBM38-202ENST00000344785 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
RBM38-202ENST00000344785 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
RBM38-202ENST00000344785 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
RBM38-202ENST00000344785 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
RBM38-202ENST00000344785 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
RBM38-202ENST00000344785 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
RBM38-202ENST00000344785 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
RBM38-202ENST00000344785 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
RBM38-202ENST00000344785 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
RBM38-202ENST00000344785 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 79 ms