RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 KRTAP4-9Q9BYQ8 210 aa2.65□□□□□ -1.98
KPNA1-201ENST00000344337 KRTAP9-3Q9BYQ3 159 aa2.65□□□□□ -1.99
KPNA1-201ENST00000344337 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
KPNA1-201ENST00000344337 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
KPNA1-201ENST00000344337 MT1LQ93083 61 aa2.51□□□□□ -2.01
KPNA1-201ENST00000344337 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
KPNA1-201ENST00000344337 SPRR2EP22531 72 aa2.48□□□□□ -2.01
KPNA1-201ENST00000344337 SPRR2BP35325 72 aa2.48□□□□□ -2.01
KPNA1-201ENST00000344337 SPRR2AP35326 72 aa2.48□□□□□ -2.01
KPNA1-201ENST00000344337 MT1EP04732 61 aa2.47□□□□□ -2.01
KPNA1-201ENST00000344337 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
KPNA1-201ENST00000344337 PRM1P04553 51 aa2.46□□□□□ -2.02
KPNA1-201ENST00000344337 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
KPNA1-201ENST00000344337 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
KPNA1-201ENST00000344337 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
KPNA1-201ENST00000344337 MT1MQ8N339 61 aa2.37□□□□□ -2.03
KPNA1-201ENST00000344337 SPRR2DP22532 72 aa2.34□□□□□ -2.04
KPNA1-201ENST00000344337 KRTAP9-7A8MTY7 169 aa2.33□□□□□ -2.04
KPNA1-201ENST00000344337 MT4P47944 62 aa2.32□□□□□ -2.04
KPNA1-201ENST00000344337 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
KPNA1-201ENST00000344337 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
KPNA1-201ENST00000344337 KRTAP2-3P0C7H8 128 aa2.29□□□□□ -2.04
KPNA1-201ENST00000344337 KRTAP2-4Q9BYR9 128 aa2.29□□□□□ -2.04
KPNA1-201ENST00000344337 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
KPNA1-201ENST00000344337 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
KPNA1-201ENST00000344337 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
KPNA1-201ENST00000344337 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
KPNA1-201ENST00000344337 LCE1DQ5T752 114 aa2.22□□□□□ -2.05
KPNA1-201ENST00000344337 LCE2DQ5TA82 110 aaPredicted RBP2.22□□□□□ -2.05
KPNA1-201ENST00000344337 LCE2AQ5TA79 106 aaPredicted RBP2.2□□□□□ -2.06
KPNA1-201ENST00000344337 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
KPNA1-201ENST00000344337 KRTAP9-2Q9BYQ4 174 aa2.17□□□□□ -2.06
KPNA1-201ENST00000344337 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.07
KPNA1-201ENST00000344337 MT3P25713 68 aa2.09□□□□□ -2.07
KPNA1-201ENST00000344337 KRTAP19-4Q3LI73 84 aa2.08□□□□□ -2.08
KPNA1-201ENST00000344337 MT1AP04731 61 aa2.06□□□□□ -2.08
KPNA1-201ENST00000344337 LCE5AQ5TCM9 118 aa2.04□□□□□ -2.08
KPNA1-201ENST00000344337 LCE1AQ5T7P2 110 aa2□□□□□ -2.09
KPNA1-201ENST00000344337 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
KPNA1-201ENST00000344337 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
KPNA1-201ENST00000344337 KRTAP2-2Q9BYT5 123 aa1.92□□□□□ -2.1
KPNA1-201ENST00000344337 KRTAP4-6Q9BYQ5 205 aa1.89□□□□□ -2.11
KPNA1-201ENST00000344337 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
KPNA1-201ENST00000344337 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
KPNA1-201ENST00000344337 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
KPNA1-201ENST00000344337 KRTAP9-6A0A140TA67 174 aa1.8□□□□□ -2.12
KPNA1-201ENST00000344337 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.79□□□□□ -2.12
KPNA1-201ENST00000344337 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
KPNA1-201ENST00000344337 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
KPNA1-201ENST00000344337 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
KPNA1-201ENST00000344337 LCE4AQ5TA78 99 aa1.75□□□□□ -2.13
KPNA1-201ENST00000344337 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
KPNA1-201ENST00000344337 KRTAP4-12Q9BQ66 201 aa1.72□□□□□ -2.13
KPNA1-201ENST00000344337 KRTAP4-2Q9BYR5 136 aa1.72□□□□□ -2.13
KPNA1-201ENST00000344337 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
KPNA1-201ENST00000344337 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
KPNA1-201ENST00000344337 KRTAP20-2Q3LI61 65 aa1.61□□□□□ -2.15
KPNA1-201ENST00000344337 KRTAP5-9P26371 169 aa1.57□□□□□ -2.16
KPNA1-201ENST00000344337 NEBP20929 6669 aa1.57□□□□□ -2.16
KPNA1-201ENST00000344337 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
KPNA1-201ENST00000344337 KRTAP9-9Q9BYP9 154 aa1.39□□□□□ -2.19
KPNA1-201ENST00000344337 KRTAP5-4Q6L8H1 288 aa1.39□□□□□ -2.19
KPNA1-201ENST00000344337 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
KPNA1-201ENST00000344337 KRTAP5-3Q6L8H2 238 aa1.33□□□□□ -2.2
KPNA1-201ENST00000344337 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
KPNA1-201ENST00000344337 GPR98Q8WXG9 6306 aa1.31□□□□□ -2.2
KPNA1-201ENST00000344337 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
KPNA1-201ENST00000344337 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
KPNA1-201ENST00000344337 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
KPNA1-201ENST00000344337 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
KPNA1-201ENST00000344337 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.09□□□□□ -2.24
KPNA1-201ENST00000344337 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
KPNA1-201ENST00000344337 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
KPNA1-201ENST00000344337 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
KPNA1-201ENST00000344337 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
KPNA1-201ENST00000344337 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
KPNA1-201ENST00000344337 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 148.6 ms