RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 MT1MQ8N339 61 aa2.75□□□□□ -1.97
FGD6-201ENST00000343958 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
FGD6-201ENST00000343958 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
FGD6-201ENST00000343958 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
FGD6-201ENST00000343958 LCE2AQ5TA79 106 aaPredicted RBP2.68□□□□□ -1.98
FGD6-201ENST00000343958 MT4P47944 62 aa2.64□□□□□ -1.99
FGD6-201ENST00000343958 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
FGD6-201ENST00000343958 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
FGD6-201ENST00000343958 PRM1P04553 51 aa2.6□□□□□ -1.99
FGD6-201ENST00000343958 LCE2DQ5TA82 110 aaPredicted RBP2.6□□□□□ -1.99
FGD6-201ENST00000343958 FSIP2Q5CZC0 6907 aa2.59□□□□□ -1.99
FGD6-201ENST00000343958 KRTAP9-2Q9BYQ4 174 aa2.58□□□□□ -2
FGD6-201ENST00000343958 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
FGD6-201ENST00000343958 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
FGD6-201ENST00000343958 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
FGD6-201ENST00000343958 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
FGD6-201ENST00000343958 MT3P25713 68 aa2.55□□□□□ -2
FGD6-201ENST00000343958 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
FGD6-201ENST00000343958 MT1AP04731 61 aa2.53□□□□□ -2
FGD6-201ENST00000343958 MUC2Q02817 5179 aa2.47□□□□□ -2.01
FGD6-201ENST00000343958 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
FGD6-201ENST00000343958 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
FGD6-201ENST00000343958 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
FGD6-201ENST00000343958 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
FGD6-201ENST00000343958 USH2AO75445 5202 aa2.4□□□□□ -2.02
FGD6-201ENST00000343958 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
FGD6-201ENST00000343958 KRTAP9-6A0A140TA67 174 aa2.38□□□□□ -2.03
FGD6-201ENST00000343958 LCE5AQ5TCM9 118 aa2.37□□□□□ -2.03
FGD6-201ENST00000343958 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
FGD6-201ENST00000343958 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
FGD6-201ENST00000343958 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
FGD6-201ENST00000343958 KRTAP9-7A8MTY7 169 aa2.33□□□□□ -2.04
FGD6-201ENST00000343958 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
FGD6-201ENST00000343958 KMT2DO14686 5537 aa2.27□□□□□ -2.05
FGD6-201ENST00000343958 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.25□□□□□ -2.05
FGD6-201ENST00000343958 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
FGD6-201ENST00000343958 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
FGD6-201ENST00000343958 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
FGD6-201ENST00000343958 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
FGD6-201ENST00000343958 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
FGD6-201ENST00000343958 LCE4AQ5TA78 99 aa2.16□□□□□ -2.06
FGD6-201ENST00000343958 KRTAP2-2Q9BYT5 123 aa2.12□□□□□ -2.07
FGD6-201ENST00000343958 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
FGD6-201ENST00000343958 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
FGD6-201ENST00000343958 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
FGD6-201ENST00000343958 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
FGD6-201ENST00000343958 KRTAP5-9P26371 169 aa2.03□□□□□ -2.08
FGD6-201ENST00000343958 KRTAP4-6Q9BYQ5 205 aa2.02□□□□□ -2.09
FGD6-201ENST00000343958 NEBP20929 6669 aa2□□□□□ -2.09
FGD6-201ENST00000343958 KRTAP4-11Q9BYQ6 195 aa1.97□□□□□ -2.09
FGD6-201ENST00000343958 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
FGD6-201ENST00000343958 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
FGD6-201ENST00000343958 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
FGD6-201ENST00000343958 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
FGD6-201ENST00000343958 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
FGD6-201ENST00000343958 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
FGD6-201ENST00000343958 KRTAP9-9Q9BYP9 154 aa1.8□□□□□ -2.12
FGD6-201ENST00000343958 KRTAP5-4Q6L8H1 288 aa1.77□□□□□ -2.13
FGD6-201ENST00000343958 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
FGD6-201ENST00000343958 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
FGD6-201ENST00000343958 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
FGD6-201ENST00000343958 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
FGD6-201ENST00000343958 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
FGD6-201ENST00000343958 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
FGD6-201ENST00000343958 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
FGD6-201ENST00000343958 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
FGD6-201ENST00000343958 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
FGD6-201ENST00000343958 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
FGD6-201ENST00000343958 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
FGD6-201ENST00000343958 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
FGD6-201ENST00000343958 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
FGD6-201ENST00000343958 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
FGD6-201ENST00000343958 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
FGD6-201ENST00000343958 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
FGD6-201ENST00000343958 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
FGD6-201ENST00000343958 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
FGD6-201ENST00000343958 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 65.1 ms