RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
CDC42BPG-201ENST00000342711 MT3P25713 68 aa5.06□□□□□ -1.6
CDC42BPG-201ENST00000342711 MT4P47944 62 aa5.02□□□□□ -1.61
CDC42BPG-201ENST00000342711 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPG-201ENST00000342711 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
CDC42BPG-201ENST00000342711 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
CDC42BPG-201ENST00000342711 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
CDC42BPG-201ENST00000342711 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
CDC42BPG-201ENST00000342711 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
CDC42BPG-201ENST00000342711 RNF213Q63HN8 5207 aa4.83□□□□□ -1.64
CDC42BPG-201ENST00000342711 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
CDC42BPG-201ENST00000342711 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
CDC42BPG-201ENST00000342711 MUC2Q02817 5179 aa4.81□□□□□ -1.64
CDC42BPG-201ENST00000342711 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
CDC42BPG-201ENST00000342711 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
CDC42BPG-201ENST00000342711 MT1AP04731 61 aa4.74□□□□□ -1.65
CDC42BPG-201ENST00000342711 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
CDC42BPG-201ENST00000342711 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
CDC42BPG-201ENST00000342711 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
CDC42BPG-201ENST00000342711 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
CDC42BPG-201ENST00000342711 UBR4Q5T4S7 5183 aa4.62□□□□□ -1.67
CDC42BPG-201ENST00000342711 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
CDC42BPG-201ENST00000342711 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
CDC42BPG-201ENST00000342711 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
CDC42BPG-201ENST00000342711 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
CDC42BPG-201ENST00000342711 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
CDC42BPG-201ENST00000342711 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
CDC42BPG-201ENST00000342711 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
CDC42BPG-201ENST00000342711 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
CDC42BPG-201ENST00000342711 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
CDC42BPG-201ENST00000342711 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
CDC42BPG-201ENST00000342711 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
CDC42BPG-201ENST00000342711 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
CDC42BPG-201ENST00000342711 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPG-201ENST00000342711 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
CDC42BPG-201ENST00000342711 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
CDC42BPG-201ENST00000342711 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
CDC42BPG-201ENST00000342711 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
CDC42BPG-201ENST00000342711 USH2AO75445 5202 aa4.16□□□□□ -1.74
CDC42BPG-201ENST00000342711 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
CDC42BPG-201ENST00000342711 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CDC42BPG-201ENST00000342711 KMT2DO14686 5537 aa3.92□□□□□ -1.78
CDC42BPG-201ENST00000342711 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPG-201ENST00000342711 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
CDC42BPG-201ENST00000342711 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
CDC42BPG-201ENST00000342711 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
CDC42BPG-201ENST00000342711 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
CDC42BPG-201ENST00000342711 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
CDC42BPG-201ENST00000342711 NEBP20929 6669 aa3.65□□□□□ -1.82
CDC42BPG-201ENST00000342711 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
CDC42BPG-201ENST00000342711 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.84
CDC42BPG-201ENST00000342711 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
CDC42BPG-201ENST00000342711 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
CDC42BPG-201ENST00000342711 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
CDC42BPG-201ENST00000342711 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
CDC42BPG-201ENST00000342711 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
CDC42BPG-201ENST00000342711 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CDC42BPG-201ENST00000342711 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
CDC42BPG-201ENST00000342711 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
CDC42BPG-201ENST00000342711 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
CDC42BPG-201ENST00000342711 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
CDC42BPG-201ENST00000342711 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
CDC42BPG-201ENST00000342711 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
CDC42BPG-201ENST00000342711 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
CDC42BPG-201ENST00000342711 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
CDC42BPG-201ENST00000342711 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
CDC42BPG-201ENST00000342711 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
CDC42BPG-201ENST00000342711 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CDC42BPG-201ENST00000342711 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CDC42BPG-201ENST00000342711 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
CDC42BPG-201ENST00000342711 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
CDC42BPG-201ENST00000342711 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
CDC42BPG-201ENST00000342711 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CDC42BPG-201ENST00000342711 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
CDC42BPG-201ENST00000342711 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
CDC42BPG-201ENST00000342711 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
CDC42BPG-201ENST00000342711 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms