RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
SH2B3-201ENST00000341259 LCE3EQ5T5B0 92 aa6.08□□□□□ -1.44
SH2B3-201ENST00000341259 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
SH2B3-201ENST00000341259 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
SH2B3-201ENST00000341259 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
SH2B3-201ENST00000341259 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
SH2B3-201ENST00000341259 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
SH2B3-201ENST00000341259 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
SH2B3-201ENST00000341259 MT3P25713 68 aa5.81□□□□□ -1.48
SH2B3-201ENST00000341259 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
SH2B3-201ENST00000341259 MT4P47944 62 aa5.77□□□□□ -1.49
SH2B3-201ENST00000341259 MUC2Q02817 5179 aa5.7□□□□□ -1.5
SH2B3-201ENST00000341259 MT1AP04731 61 aa5.67□□□□□ -1.5
SH2B3-201ENST00000341259 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
SH2B3-201ENST00000341259 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
SH2B3-201ENST00000341259 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
SH2B3-201ENST00000341259 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
SH2B3-201ENST00000341259 PRM1P04553 51 aa5.6□□□□□ -1.51
SH2B3-201ENST00000341259 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
SH2B3-201ENST00000341259 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
SH2B3-201ENST00000341259 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
SH2B3-201ENST00000341259 LCE1AQ5T7P2 110 aa5.44□□□□□ -1.54
SH2B3-201ENST00000341259 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
SH2B3-201ENST00000341259 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
SH2B3-201ENST00000341259 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
SH2B3-201ENST00000341259 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
SH2B3-201ENST00000341259 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
SH2B3-201ENST00000341259 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
SH2B3-201ENST00000341259 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
SH2B3-201ENST00000341259 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
SH2B3-201ENST00000341259 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
SH2B3-201ENST00000341259 KRTAP20-1Q3LI63 56 aa5.26□□□□□ -1.57
SH2B3-201ENST00000341259 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
SH2B3-201ENST00000341259 USH2AO75445 5202 aa5.24□□□□□ -1.57
SH2B3-201ENST00000341259 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
SH2B3-201ENST00000341259 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
SH2B3-201ENST00000341259 KMT2DO14686 5537 aa5.02□□□□□ -1.61
SH2B3-201ENST00000341259 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
SH2B3-201ENST00000341259 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
SH2B3-201ENST00000341259 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
SH2B3-201ENST00000341259 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
SH2B3-201ENST00000341259 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
SH2B3-201ENST00000341259 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
SH2B3-201ENST00000341259 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
SH2B3-201ENST00000341259 NEBP20929 6669 aa4.57□□□□□ -1.68
SH2B3-201ENST00000341259 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
SH2B3-201ENST00000341259 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
SH2B3-201ENST00000341259 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SH2B3-201ENST00000341259 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SH2B3-201ENST00000341259 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
SH2B3-201ENST00000341259 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
SH2B3-201ENST00000341259 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
SH2B3-201ENST00000341259 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
SH2B3-201ENST00000341259 MDN1Q9NU22 5596 aa4.15□□□□□ -1.74
SH2B3-201ENST00000341259 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
SH2B3-201ENST00000341259 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
SH2B3-201ENST00000341259 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
SH2B3-201ENST00000341259 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
SH2B3-201ENST00000341259 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
SH2B3-201ENST00000341259 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
SH2B3-201ENST00000341259 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
SH2B3-201ENST00000341259 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
SH2B3-201ENST00000341259 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
SH2B3-201ENST00000341259 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
SH2B3-201ENST00000341259 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
SH2B3-201ENST00000341259 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
SH2B3-201ENST00000341259 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
SH2B3-201ENST00000341259 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
SH2B3-201ENST00000341259 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
SH2B3-201ENST00000341259 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
SH2B3-201ENST00000341259 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
SH2B3-201ENST00000341259 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SH2B3-201ENST00000341259 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
SH2B3-201ENST00000341259 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SH2B3-201ENST00000341259 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
SH2B3-201ENST00000341259 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
SH2B3-201ENST00000341259 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 146 ms