RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
RTL6-201ENST00000341255 MT3P25713 68 aa4.99□□□□□ -1.61
RTL6-201ENST00000341255 PRM1P04553 51 aa4.98□□□□□ -1.61
RTL6-201ENST00000341255 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
RTL6-201ENST00000341255 MT4P47944 62 aa4.87□□□□□ -1.63
RTL6-201ENST00000341255 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
RTL6-201ENST00000341255 UBR4Q5T4S7 5183 aa4.87□□□□□ -1.63
RTL6-201ENST00000341255 RNF213Q63HN8 5207 aa4.85□□□□□ -1.63
RTL6-201ENST00000341255 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
RTL6-201ENST00000341255 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
RTL6-201ENST00000341255 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
RTL6-201ENST00000341255 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
RTL6-201ENST00000341255 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
RTL6-201ENST00000341255 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
RTL6-201ENST00000341255 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
RTL6-201ENST00000341255 MT1AP04731 61 aa4.73□□□□□ -1.65
RTL6-201ENST00000341255 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
RTL6-201ENST00000341255 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
RTL6-201ENST00000341255 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
RTL6-201ENST00000341255 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
RTL6-201ENST00000341255 MUC2Q02817 5179 aa4.67□□□□□ -1.66
RTL6-201ENST00000341255 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
RTL6-201ENST00000341255 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
RTL6-201ENST00000341255 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
RTL6-201ENST00000341255 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
RTL6-201ENST00000341255 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
RTL6-201ENST00000341255 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
RTL6-201ENST00000341255 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
RTL6-201ENST00000341255 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
RTL6-201ENST00000341255 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
RTL6-201ENST00000341255 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
RTL6-201ENST00000341255 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
RTL6-201ENST00000341255 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
RTL6-201ENST00000341255 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
RTL6-201ENST00000341255 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
RTL6-201ENST00000341255 USH2AO75445 5202 aa4.19□□□□□ -1.74
RTL6-201ENST00000341255 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
RTL6-201ENST00000341255 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
RTL6-201ENST00000341255 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
RTL6-201ENST00000341255 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
RTL6-201ENST00000341255 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
RTL6-201ENST00000341255 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
RTL6-201ENST00000341255 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
RTL6-201ENST00000341255 KMT2DO14686 5537 aa3.92□□□□□ -1.78
RTL6-201ENST00000341255 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
RTL6-201ENST00000341255 NEBP20929 6669 aa3.74□□□□□ -1.81
RTL6-201ENST00000341255 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
RTL6-201ENST00000341255 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
RTL6-201ENST00000341255 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
RTL6-201ENST00000341255 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
RTL6-201ENST00000341255 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
RTL6-201ENST00000341255 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
RTL6-201ENST00000341255 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
RTL6-201ENST00000341255 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
RTL6-201ENST00000341255 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
RTL6-201ENST00000341255 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
RTL6-201ENST00000341255 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
RTL6-201ENST00000341255 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
RTL6-201ENST00000341255 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.89
RTL6-201ENST00000341255 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.89
RTL6-201ENST00000341255 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
RTL6-201ENST00000341255 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
RTL6-201ENST00000341255 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
RTL6-201ENST00000341255 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
RTL6-201ENST00000341255 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
RTL6-201ENST00000341255 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
RTL6-201ENST00000341255 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
RTL6-201ENST00000341255 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
RTL6-201ENST00000341255 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
RTL6-201ENST00000341255 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
RTL6-201ENST00000341255 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
RTL6-201ENST00000341255 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.04
RTL6-201ENST00000341255 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
RTL6-201ENST00000341255 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
RTL6-201ENST00000341255 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
RTL6-201ENST00000341255 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
RTL6-201ENST00000341255 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms