RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 MUC2Q02817 5179 aa6.26□□□□□ -1.41
CDK13-202ENST00000340829 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
CDK13-202ENST00000340829 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
CDK13-202ENST00000340829 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
CDK13-202ENST00000340829 MT1MQ8N339 61 aa6.15□□□□□ -1.43
CDK13-202ENST00000340829 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
CDK13-202ENST00000340829 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
CDK13-202ENST00000340829 KRTAP19-7Q3SYF9 63 aa6.08□□□□□ -1.44
CDK13-202ENST00000340829 LCE3EQ5T5B0 92 aa6.07□□□□□ -1.44
CDK13-202ENST00000340829 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
CDK13-202ENST00000340829 LCE2DQ5TA82 110 aaPredicted RBP5.84□□□□□ -1.47
CDK13-202ENST00000340829 MT3P25713 68 aa5.75□□□□□ -1.49
CDK13-202ENST00000340829 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.49
CDK13-202ENST00000340829 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.49
CDK13-202ENST00000340829 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.49
CDK13-202ENST00000340829 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
CDK13-202ENST00000340829 MT4P47944 62 aa5.71□□□□□ -1.5
CDK13-202ENST00000340829 SYNE2Q8WXH0 6885 aaKnown RBP5.65□□□□□ -1.51
CDK13-202ENST00000340829 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.51
CDK13-202ENST00000340829 MT1AP04731 61 aa5.64□□□□□ -1.51
CDK13-202ENST00000340829 PRM1P04553 51 aa5.64□□□□□ -1.51
CDK13-202ENST00000340829 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
CDK13-202ENST00000340829 USH2AO75445 5202 aa5.53□□□□□ -1.52
CDK13-202ENST00000340829 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
CDK13-202ENST00000340829 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
CDK13-202ENST00000340829 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
CDK13-202ENST00000340829 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
CDK13-202ENST00000340829 KMT2DO14686 5537 aa5.46□□□□□ -1.54
CDK13-202ENST00000340829 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
CDK13-202ENST00000340829 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
CDK13-202ENST00000340829 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
CDK13-202ENST00000340829 LCE1AQ5T7P2 110 aa5.35□□□□□ -1.55
CDK13-202ENST00000340829 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
CDK13-202ENST00000340829 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
CDK13-202ENST00000340829 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
CDK13-202ENST00000340829 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
CDK13-202ENST00000340829 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
CDK13-202ENST00000340829 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
CDK13-202ENST00000340829 KRTAP20-1Q3LI63 56 aa5.06□□□□□ -1.6
CDK13-202ENST00000340829 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
CDK13-202ENST00000340829 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
CDK13-202ENST00000340829 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
CDK13-202ENST00000340829 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
CDK13-202ENST00000340829 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
CDK13-202ENST00000340829 MUC19Q7Z5P9 8384 aa4.67□□□□□ -1.66
CDK13-202ENST00000340829 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
CDK13-202ENST00000340829 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
CDK13-202ENST00000340829 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
CDK13-202ENST00000340829 NEBP20929 6669 aa4.59□□□□□ -1.67
CDK13-202ENST00000340829 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
CDK13-202ENST00000340829 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
CDK13-202ENST00000340829 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.7
CDK13-202ENST00000340829 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
CDK13-202ENST00000340829 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
CDK13-202ENST00000340829 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.73
CDK13-202ENST00000340829 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
CDK13-202ENST00000340829 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
CDK13-202ENST00000340829 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
CDK13-202ENST00000340829 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
CDK13-202ENST00000340829 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
CDK13-202ENST00000340829 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
CDK13-202ENST00000340829 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
CDK13-202ENST00000340829 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
CDK13-202ENST00000340829 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
CDK13-202ENST00000340829 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
CDK13-202ENST00000340829 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
CDK13-202ENST00000340829 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CDK13-202ENST00000340829 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
CDK13-202ENST00000340829 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CDK13-202ENST00000340829 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
CDK13-202ENST00000340829 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
CDK13-202ENST00000340829 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
CDK13-202ENST00000340829 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
CDK13-202ENST00000340829 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CDK13-202ENST00000340829 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CDK13-202ENST00000340829 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
CDK13-202ENST00000340829 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms