RNA–Protein interactions for RNA: ENST00000340666.5

SYN1-202, Transcript of synapsin I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1-202ENST00000340666 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
SYN1-202ENST00000340666 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
SYN1-202ENST00000340666 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
SYN1-202ENST00000340666 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
SYN1-202ENST00000340666 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
SYN1-202ENST00000340666 KRTAP19-6Q3LI70 58 aa5.38□□□□□ -1.55
SYN1-202ENST00000340666 FCGBPQ9Y6R7 5405 aaPredicted RBP5.19□□□□□ -1.58
SYN1-202ENST00000340666 MT1MQ8N339 61 aa5.1□□□□□ -1.59
SYN1-202ENST00000340666 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
SYN1-202ENST00000340666 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
SYN1-202ENST00000340666 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
SYN1-202ENST00000340666 MT1GP13640 62 aa5.08□□□□□ -1.6
SYN1-202ENST00000340666 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
SYN1-202ENST00000340666 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
SYN1-202ENST00000340666 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
SYN1-202ENST00000340666 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
SYN1-202ENST00000340666 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
SYN1-202ENST00000340666 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
SYN1-202ENST00000340666 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
SYN1-202ENST00000340666 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
SYN1-202ENST00000340666 NEBP20929 6669 aa4.81□□□□□ -1.64
SYN1-202ENST00000340666 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
SYN1-202ENST00000340666 KRTAP20-1Q3LI63 56 aa4.75□□□□□ -1.65
SYN1-202ENST00000340666 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
SYN1-202ENST00000340666 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
SYN1-202ENST00000340666 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
SYN1-202ENST00000340666 MT1AP04731 61 aa4.66□□□□□ -1.66
SYN1-202ENST00000340666 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
SYN1-202ENST00000340666 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
SYN1-202ENST00000340666 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
SYN1-202ENST00000340666 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
SYN1-202ENST00000340666 SPRR2EP22531 72 aa4.5□□□□□ -1.69
SYN1-202ENST00000340666 SPRR2BP35325 72 aa4.5□□□□□ -1.69
SYN1-202ENST00000340666 SPRR2AP35326 72 aa4.5□□□□□ -1.69
SYN1-202ENST00000340666 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
SYN1-202ENST00000340666 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
SYN1-202ENST00000340666 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
SYN1-202ENST00000340666 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
SYN1-202ENST00000340666 SPRR2DP22532 72 aa4.36□□□□□ -1.71
SYN1-202ENST00000340666 PRM1P04553 51 aa4.35□□□□□ -1.71
SYN1-202ENST00000340666 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.72
SYN1-202ENST00000340666 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SYN1-202ENST00000340666 MT3P25713 68 aa4.11□□□□□ -1.75
SYN1-202ENST00000340666 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SYN1-202ENST00000340666 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
SYN1-202ENST00000340666 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
SYN1-202ENST00000340666 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
SYN1-202ENST00000340666 MT4P47944 62 aa3.8□□□□□ -1.8
SYN1-202ENST00000340666 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
SYN1-202ENST00000340666 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
SYN1-202ENST00000340666 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
SYN1-202ENST00000340666 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
SYN1-202ENST00000340666 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
SYN1-202ENST00000340666 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
SYN1-202ENST00000340666 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
SYN1-202ENST00000340666 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
SYN1-202ENST00000340666 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
SYN1-202ENST00000340666 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
SYN1-202ENST00000340666 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SYN1-202ENST00000340666 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
SYN1-202ENST00000340666 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
SYN1-202ENST00000340666 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
SYN1-202ENST00000340666 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
SYN1-202ENST00000340666 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
SYN1-202ENST00000340666 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
SYN1-202ENST00000340666 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
SYN1-202ENST00000340666 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
SYN1-202ENST00000340666 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
SYN1-202ENST00000340666 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SYN1-202ENST00000340666 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
SYN1-202ENST00000340666 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
SYN1-202ENST00000340666 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
SYN1-202ENST00000340666 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SYN1-202ENST00000340666 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SYN1-202ENST00000340666 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
SYN1-202ENST00000340666 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
SYN1-202ENST00000340666 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms