RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
TPX2-202ENST00000340513 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
TPX2-202ENST00000340513 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.77
TPX2-202ENST00000340513 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
TPX2-202ENST00000340513 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
TPX2-202ENST00000340513 PRM1P04553 51 aa3.88□□□□□ -1.79
TPX2-202ENST00000340513 MT1BP07438 61 aa3.85□□□□□ -1.79
TPX2-202ENST00000340513 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
TPX2-202ENST00000340513 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
TPX2-202ENST00000340513 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
TPX2-202ENST00000340513 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
TPX2-202ENST00000340513 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
TPX2-202ENST00000340513 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
TPX2-202ENST00000340513 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
TPX2-202ENST00000340513 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
TPX2-202ENST00000340513 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
TPX2-202ENST00000340513 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
TPX2-202ENST00000340513 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
TPX2-202ENST00000340513 LCE3BQ5TA77 95 aa3.65□□□□□ -1.82
TPX2-202ENST00000340513 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
TPX2-202ENST00000340513 MT1GP13640 62 aa3.63□□□□□ -1.83
TPX2-202ENST00000340513 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
TPX2-202ENST00000340513 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
TPX2-202ENST00000340513 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
TPX2-202ENST00000340513 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
TPX2-202ENST00000340513 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
TPX2-202ENST00000340513 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
TPX2-202ENST00000340513 MT1LQ93083 61 aa3.53□□□□□ -1.84
TPX2-202ENST00000340513 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
TPX2-202ENST00000340513 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
TPX2-202ENST00000340513 NEBP20929 6669 aa3.42□□□□□ -1.86
TPX2-202ENST00000340513 MT1EP04732 61 aa3.39□□□□□ -1.87
TPX2-202ENST00000340513 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
TPX2-202ENST00000340513 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
TPX2-202ENST00000340513 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
TPX2-202ENST00000340513 SPRR2EP22531 72 aa3.33□□□□□ -1.88
TPX2-202ENST00000340513 SPRR2BP35325 72 aa3.33□□□□□ -1.88
TPX2-202ENST00000340513 SPRR2AP35326 72 aa3.33□□□□□ -1.88
TPX2-202ENST00000340513 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
TPX2-202ENST00000340513 MT1AP04731 61 aa3.22□□□□□ -1.89
TPX2-202ENST00000340513 SPRR2DP22532 72 aa3.19□□□□□ -1.9
TPX2-202ENST00000340513 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
TPX2-202ENST00000340513 MT1MQ8N339 61 aa3.15□□□□□ -1.9
TPX2-202ENST00000340513 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
TPX2-202ENST00000340513 KRTAP19-3Q7Z4W3 81 aa3.11□□□□□ -1.91
TPX2-202ENST00000340513 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
TPX2-202ENST00000340513 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
TPX2-202ENST00000340513 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
TPX2-202ENST00000340513 MT4P47944 62 aa2.89□□□□□ -1.95
TPX2-202ENST00000340513 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
TPX2-202ENST00000340513 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
TPX2-202ENST00000340513 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
TPX2-202ENST00000340513 MT3P25713 68 aa2.72□□□□□ -1.97
TPX2-202ENST00000340513 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
TPX2-202ENST00000340513 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
TPX2-202ENST00000340513 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
TPX2-202ENST00000340513 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
TPX2-202ENST00000340513 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
TPX2-202ENST00000340513 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
TPX2-202ENST00000340513 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
TPX2-202ENST00000340513 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
TPX2-202ENST00000340513 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
TPX2-202ENST00000340513 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
TPX2-202ENST00000340513 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
TPX2-202ENST00000340513 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
TPX2-202ENST00000340513 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
TPX2-202ENST00000340513 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
TPX2-202ENST00000340513 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
TPX2-202ENST00000340513 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
TPX2-202ENST00000340513 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
TPX2-202ENST00000340513 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
TPX2-202ENST00000340513 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
TPX2-202ENST00000340513 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
TPX2-202ENST00000340513 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
TPX2-202ENST00000340513 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
TPX2-202ENST00000340513 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
TPX2-202ENST00000340513 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 1463.7 ms